Jatropha Genome Database

JcCB0279751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0279751.10 - phase: 0 
         (714 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008939 conserved hypothetical protein                          182   2e-45

>30174.m008939 conserved hypothetical protein
          Length = 1236

 Score =  182 bits (92), Expect = 2e-45
 Identities = 326/404 (80%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgtcaaaactccatgaccactacgctttcagacccccgccctctctctctccccaagaa 156
           |||||||| ||||||||||| ||| | || |  ||||| || ||||||||||| ||| | 
Sbjct: 82  tcgtcaaagctccatgaccagtactcctttatgcccccaccttctctctctcctcaaaac 141

                                                                       
Query: 157 cctgataaccctaatccgactaccaggaaaaagcaaaagcctttgtatcgtccgccttcc 216
           | | | ||||||||| | ||| | | |||||||| ||||||| | |||||||| ||||| 
Sbjct: 142 catcaaaaccctaattcaactcctaagaaaaagcgaaagcctctatatcgtccaccttct 201

                                                                       
Query: 217 acgctcgatcggacgggcaaaaagccgacacactccgatctgccgtttgattttcggtat 276
            | ||||| || || || ||||| || || || || ||||| ||||||||||| || |||
Sbjct: 202 tcactcgaccgaaccgggaaaaaacccactcattcagatcttccgtttgatttccgatat 261

                                                                       
Query: 277 agttacacggagagtagtcagtcggtgaggcccattggacttagagagcctaagtactcg 336
           ||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 262 agttacacggagagctctcagtcggtaaggcccattggacttagagagcctaagtactct 321

                                                                       
Query: 337 ccatttggtccagaccgtttggaccgatcatggaccggtgtatgcgccccggctgttgat 396
           |||||||||||||||||| | |||||| ||||||| || || || || |||| |||||| 
Sbjct: 322 ccatttggtccagaccgtcttgaccgagcatggactggagtttgtgctccggttgttgaa 381

                                                                       
Query: 397 ccgaaggtgaagtcattggacggaactgatgatcctaatttggaggagaagaggaagttg 456
           |||||| | ||||   |||| ||  | ||  |||| |||||||||||||||||   || |
Sbjct: 382 ccgaagttaaagtttgtggatgggtcagagaatccgaatttggaggagaagagacggtgg 441

                                                       
Query: 457 atgagagagaaaatccaaggagacccacttaccaatgctgagag 500
             ||||||| |||| |||||  | |||||||| |||||||||||
Sbjct: 442 tggagagagcaaattcaaggtcagccacttactaatgctgagag 485