Jatropha Genome Database
- JcCB0279501.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0279501.10 - phase: 0
(978 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29656.m000475 conserved hypothetical protein 347 8e-95
>29656.m000475 conserved hypothetical protein
Length = 1017
Score = 347 bits (175), Expect = 8e-95
Identities = 295/335 (88%)
Strand = Plus / Plus
Query: 640 actgttgtgcacagtacaagtactgctttggacagtgcaaatgctgctaatcgtaaaaga 699
|||||| |||| | ||||| | ||||| |||||||| || |||||||||||||||||||
Sbjct: 679 actgttatgcataatacaacttctgctatggacagtacagctgctgctaatcgtaaaaga 738
Query: 700 ggtcgcaaggggattgatgatgctattgcaggagctatatcacacatggcagctgcatca 759
||||| ||||| ||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 739 ggtcgtaagggaattgatgatgctattgctggagctatattgcacatggcagctgcatca 798
Query: 760 aggcttaggacagctgccataaggcaaattagtgaaagatacagtgttgctgattgtatc 819
||||| || ||||||||||||||| || |||||||||||| |||||| |||||||||||
Sbjct: 799 aggctgagaacagctgccataaggaaagttagtgaaagattcagtgtagctgattgtatt 858
Query: 820 aaggaattggatgcaatgcaaggtgtggaagaagggatctattttgctgctctggatttg 879
||||||||| |||| || |||||| |||||||||| |||||||||||||||| ||||||
Sbjct: 859 aaggaattgaatgcgatacaaggtttggaagaaggagtctattttgctgctctagatttg 918
Query: 880 tttgacaaccctaatgctagagagattttcttgtctctcaaaggcgacaagcgaatgatt 939
|||||||||| ||||| || ||||| ||||||||||| ||||| |||||||| |||||
Sbjct: 919 tttgacaaccgcaatgcaagggagatcttcttgtctcttaaaggtgacaagcgcatgatc 978
Query: 940 tggttgcgtggtaagtgtactgctcatctaatatc 974
||||||||||| ||||||||| |||||| ||||||
Sbjct: 979 tggttgcgtggcaagtgtacttctcatccaatatc 1013
Score = 301 bits (152), Expect = 4e-81
Identities = 383/460 (83%)
Strand = Plus / Plus
Query: 39 gcagcaaccagaaccacaatcacgggctcggtggacaactgggcttactaagatatttgc 98
||||| |||||||| |||| |||||| ||||||||||||| || || |||||||||||
Sbjct: 42 gcagccaccagaactacaaatgcgggctaggtggacaactggtctgacgaagatatttgc 101
Query: 99 agacttgttggttgaccaggttcagaaagggaataaactaaataacaattcttttaacaa 158
||||||| ||||||| |||||||| |||||||||||||| | ||||| || ||||||||
Sbjct: 102 agacttgatggttgatcaggttcataaagggaataaacttagcaacaactcatttaacaa 161
Query: 159 gaaagcatggacggttatgtgtgatgaattttatcagaagacaggactgagatgggataa 218
||||||||||| |||||||||||||||||||| | || || ||||| | ||||||||
Sbjct: 162 gaaagcatggaatattatgtgtgatgaattttatgaaaaaactggacttaattgggataa 221
Query: 219 ggagcagctcaaaaatagatactctgtcatgaagaggcagcactctattgtaaagtcact 278
|||||||| || || |||| || |||||| || |||||| ||||||| ||||||||
Sbjct: 222 agagcagctgaagaacagattttcaatcatgaggaagcagcatgctattgtgaagtcact 281
Query: 279 tatcaatcaaagagaattttgtctagatgcatctacagggaacgttattgcaagcaatga 338
| |||||||||| ||||| | | || | ||| ||||||||| |||| ||||| |||||
Sbjct: 282 tctcaatcaaagtgaattccatttggacgaatccacagggaacattatagcaagtaatga 341
Query: 339 agcatggaacgaatacataaaggcacatcctgatgctgagcctataagagttagtggctg 398
||||||||| |||||| |||| |||||||||||||||||||||||||| |||||||||
Sbjct: 342 agcatggaatcgatacatcaagggacatcctgatgctgagcctataagaggtagtggctg 401
Query: 399 cccaatcttcaaacagcttggtgtgatattctcagatgcgctaaataatgagaaccatga 458
|||||||| ||||||||| || |||||||||||||| | ||| ||||| || ||||
Sbjct: 402 cccaatctacaaacagctcggcgtgatattctcagagccattaactaatggaaaacatgt 461
Query: 459 agagtcagctgaacaagaggaagagtttccttcatcagtt 498
|||||| |||||| ||||||||| ||||||| ||||||
Sbjct: 462 ccagtcagttgaacatgaggaagagcttccttcgtcagtt 501