Jatropha Genome Database

JcCB0279151.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0279151.10 - phase: 0 
         (210 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014486 conserved hypothetical protein                          101   2e-21

>30147.m014486 conserved hypothetical protein
          Length = 168

 Score =  101 bits (51), Expect = 2e-21
 Identities = 120/143 (83%)
 Strand = Plus / Minus

                                                                       
Query: 68  tccagctaccaggaagcaccaggcatgtagaatttggcagcttcaagaccaatggcaagg 127
           ||||||| || || ||||||||||| || || |||||| ||||||||||||| || ||||
Sbjct: 161 tccagcttccggggagcaccaggcacgttgagtttggcggcttcaagaccaacggaaagg 102

                                                                       
Query: 128 ctattgttgttcacactgtcatcttctttagtgtcttcaccattctcattctggcagttc 187
           ||||  ||||||||||  || |||||||| | ||||||||||| |||||||||||| |  
Sbjct: 101 ctatccttgttcacaccatcctcttctttggcgtcttcaccatcctcattctggcactcg 42

                                  
Query: 188 gcgttcgcatttacactggctaa 210
           || | ||||| ||||||||||||
Sbjct: 41  gcatccgcatctacactggctaa 19