Jatropha Genome Database

JcCB0273351.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0273351.10 - phase: 0 /partial
         (717 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29747.m001102 hypothetical protein                                     90   2e-17
45420.m000032 conserved hypothetical protein                           56   3e-07

>29747.m001102 hypothetical protein
          Length = 495

 Score = 89.7 bits (45), Expect = 2e-17
 Identities = 126/153 (82%)
 Strand = Plus / Plus

                                                                       
Query: 100 tttacaatagtggaagctgagcgccgcctattagccagtgcactacttgatttctccaac 159
           |||||||| || ||||||||||| ||||||||||| | |||  |  | |||||||| |||
Sbjct: 25  tttacaatggttgaagctgagcgacgcctattagcgaatgctttgttggatttctctaac 84

                                                                       
Query: 160 caatatttcattctcctttcggaatcttgcattcctctcttcaacttctccacaatctac 219
           |||  |||  ||||||||||||| ||||||||||| || |||||  |||| ||||| |||
Sbjct: 85  caacgttttgttctcctttcggagtcttgcattcccctattcaatctctctacaatttac 144

                                            
Query: 220 aattatttaatgggttcagaaaaatcttttgta 252
            |||| |||||| ||||| ||||||||| ||||
Sbjct: 145 cattacttaatgagttcaaaaaaatcttatgta 177



 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 636 tatttgcttcttgtttgcaagaaagttcgtgcctaatgctttg 678
           |||||||||||||||||||||||| ||| ||||||| ||||||
Sbjct: 411 tatttgcttcttgtttgcaagaaaattcatgcctaacgctttg 453


>45420.m000032 conserved hypothetical protein
          Length = 861

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 643 ttcttgtttgcaagaaagttcgtgcctaatgctttgcctaggcttctgagatttgc 698
           ||||||||||||||||| ||| |||||| |||||||  ||||||  ||||||||||
Sbjct: 778 ttcttgtttgcaagaaaattcctgcctactgctttggataggctgttgagatttgc 833