Jatropha Genome Database

JcCB0273241.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0273241.10 - phase: 2 /partial
         (193 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29794.m003448 lupus la ribonucleoprotein, putative                    101   1e-21

>29794.m003448 lupus la ribonucleoprotein, putative
          Length = 1485

 Score =  101 bits (51), Expect = 1e-21
 Identities = 98/113 (86%), Gaps = 3/113 (2%)
 Strand = Plus / Plus

                                                                        
Query: 14   ggtgaggcagagaaggagtattggagcctactccgtggcaatcaagaaaagcattggcaa 73
            ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| ||  |
Sbjct: 1318 ggtgaggcagagaaggaatattggagccttctccgaggcaatcaagaaaagcatcgggga 1377

                                                                 
Query: 74   gataagggcaaccgaggaaggaaaggaaaaaactttaggggaggcggtaaaca 126
             ||| ||| ||||||||||||  ||||||| ||||||   |||||||||||||
Sbjct: 1378 aatatgggtaaccgaggaaggggaggaaaacacttta---gaggcggtaaaca 1427