Jatropha Genome Database
- JcCB0272781.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0272781.10 - phase: 0
(639 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29680.m001686 r2r3-myb transcription factor, putative 295 2e-79
30005.m001298 Transcription repressor MYB4, putative 86 3e-16
30225.m001697 r2r3-myb transcription factor, putative 82 5e-15
30054.m000809 r2r3-myb transcription factor, putative 82 5e-15
28154.m000040 r2r3-myb transcription factor, putative 80 2e-14
29005.m000265 r2r3-myb transcription factor, putative 70 2e-11
27956.m000359 r2r3-myb transcription factor, putative 68 7e-11
28226.m000839 r2r3-myb transcription factor, putative 66 3e-10
29933.m001454 Transcription repressor MYB4, putative 66 3e-10
28052.m000040 r2r3-myb transcription factor, putative 62 4e-09
29739.m003608 r2r3-myb transcription factor, putative 62 4e-09
29933.m001453 r2r3-myb transcription factor, putative 58 7e-08
30169.m006454 r2r3-myb transcription factor, putative 56 3e-07
29602.m000218 r2r3-myb transcription factor, putative 56 3e-07
29933.m001439 r2r3-myb transcription factor, putative 56 3e-07
>29680.m001686 r2r3-myb transcription factor, putative
Length = 543
Score = 295 bits (149), Expect = 2e-79
Identities = 226/249 (90%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 13 ccttgctgtgaaaatatggggttgaagaagggaccatggacacctgaagaagatcaaatc 72
|||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 13 ccttgctgtgaaaagatgggtttgaagaagggaccatggacgcctgaagaagatcaaatc 72
Query: 73 ttgatctcttacatccagcgttatggccatggcaactggcgagctctacctaggcaagca 132
||| | |||||||| || || ||||||||| ||||||||||||| || || | |||||||
Sbjct: 73 ttggtttcttacattcaacggtatggccatagcaactggcgagcactgcccaagcaagca 132
Query: 133 ggtttattaaggtgtggaaagagttgcaggcttagatggataaattacttgaggccagat 192
||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 133 ggtatattaaggtgtggaaagagttgcaggcttagatggataaactacctgaggccagat 192
Query: 193 atcaaaagaggaaacttca-cagatgaagaagaagaaactatcattaagctacgtcagat 251
|| ||| |||||||||||| ||| |||||||||||||||||||||||| |||| |||| |
Sbjct: 193 attaaacgaggaaacttcagcag-tgaagaagaagaaactatcattaaactacatcagct 251
Query: 252 tcttggaaa 260
|||||||||
Sbjct: 252 tcttggaaa 260
>30005.m001298 Transcription repressor MYB4, putative
Length = 909
Score = 85.7 bits (43), Expect = 3e-16
Identities = 194/239 (81%), Gaps = 4/239 (1%)
Strand = Plus / Plus
Query: 1 atggtgagaattccttgctgtgaaaatatggggttgaagaagggaccatggacacctgaa 60
||||||||| |||||||||||| || ||||| || ||||| || || ||||| |||||
Sbjct: 1 atggtgagagctccttgctgtgagaaaatgggattaaagaaaggtccctggactcctgag 60
Query: 61 gaagatcaaat-cttgatctcttacatccagcgttatggccatggcaactggcgagctct 119
||||||||||| |||| || |||||| || | ||||| |||||||| ||| | || ||
Sbjct: 61 gaagatcaaatacttg-tcaattacattcaacaatatggtcatggcaattggagggcact 119
Query: 120 acctaggcaagcaggtttattaaggtgtggaaagagttgcaggcttagatggataaatta 179
|||| ||||| |||||| | |||||||||||||| ||||| || ||||||| ||||||
Sbjct: 120 tcctaaacaagctggtttactgaggtgtggaaagagctgcagactgagatggacaaatta 179
Query: 180 cttgaggccagatatcaaaagaggaaacttca-cagatgaagaagaagaaactatcatt 237
| |||| || || || ||| |||| || |||| |||| |||||||||||||| ||||||
Sbjct: 180 cctgagacctgacattaaacgaggcaatttcaccaga-gaagaagaagaaaccatcatt 237
>30225.m001697 r2r3-myb transcription factor, putative
Length = 810
Score = 81.8 bits (41), Expect = 5e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 140 taaggtgtggaaagagttgcaggcttagatggataaattacttgaggccagatatcaaaa 199
|||| ||||| |||||||| |||||||| |||||||| ||| | ||||| ||| |||| |
Sbjct: 140 taagatgtggcaagagttgtaggcttaggtggataaactaccttaggccggatctcaaga 199
Query: 200 gaggaaacttcacagatgaagaaga 224
|||||||||||||||| ||||||||
Sbjct: 200 gaggaaacttcacagaagaagaaga 224
>30054.m000809 r2r3-myb transcription factor, putative
Length = 969
Score = 81.8 bits (41), Expect = 5e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 145 tgtggaaagagttgcaggcttagatggataaattacttgaggccagatatcaaaagagga 204
||||||||||||||||| || |||||| |||||| | ||||| |||||||||||||||
Sbjct: 148 tgtggaaagagttgcagactgcgatggacaaattatctaaggcctgatatcaaaagagga 207
Query: 205 aacttcacagatgaagaagaa 225
|| ||||| ||||||||||||
Sbjct: 208 aagttcaccgatgaagaagaa 228
>28154.m000040 r2r3-myb transcription factor, putative
Length = 906
Score = 79.8 bits (40), Expect = 2e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 145 tgtggaaagagttgcaggcttagatggataaattacttgaggccagatatcaaaagagga 204
||||| ||||||||||| || ||||||||||||||||||||||| ||| | ||||||||
Sbjct: 145 tgtggcaagagttgcagactcagatggataaattacttgaggcctgatcttaaaagaggc 204
Query: 205 aacttcacagatgaagaaga 224
||||| || || ||||||||
Sbjct: 205 aactttactgaagaagaaga 224
>29005.m000265 r2r3-myb transcription factor, putative
Length = 297
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 130 gcaggtttattaaggtgtggaaagagttgcaggcttagatggataaattacttgaggcca 189
||||| || |||||||||||||||||||||||||| ||||||| ||| || || ||||||
Sbjct: 130 gcaggattgttaaggtgtggaaagagttgcaggctgagatggacaaactatttaaggcca 189
Query: 190 gat 192
|||
Sbjct: 190 gat 192
>27956.m000359 r2r3-myb transcription factor, putative
Length = 990
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 142 aggtgtggaaagagttgcaggcttagatggataaattacttgaggccagatatcaaaaga 201
||||||||||| |||||||| || ||||||||||||||| |||| |||||| | ||||||
Sbjct: 139 aggtgtggaaaaagttgcagactgagatggataaattacctgagaccagatctaaaaaga 198
Query: 202 gg 203
||
Sbjct: 199 gg 200
>28226.m000839 r2r3-myb transcription factor, putative
Length = 843
Score = 65.9 bits (33), Expect = 3e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 145 tgtggaaagagttgcaggcttagatggataaattacttgaggccagatatcaaaagagga 204
||||||||||| ||||||||| | ||| | ||||||||||| || ||||| || ||||||
Sbjct: 145 tgtggaaagagctgcaggcttcgctggttgaattacttgagacctgatattaagagagga 204
Query: 205 aacttcacagatgaagaagaa 225
||| || ||||||| ||||||
Sbjct: 205 aacatctcagatgacgaagaa 225
>29933.m001454 Transcription repressor MYB4, putative
Length = 1035
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 151 aagagttgcaggcttagatggataaattacttgaggccagatatcaaaagaggaaacttc 210
||||||||||||||| | ||| | |||||| ||||||||||||| || ||||||||||||
Sbjct: 154 aagagttgcaggcttcggtgggtgaattacctgaggccagatataaagagaggaaacttc 213
Query: 211 a 211
|
Sbjct: 214 a 214
>28052.m000040 r2r3-myb transcription factor, putative
Length = 1077
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 34 ttgaagaagggaccatggacacctgaagaagatca 68
|||||||| ||||||||||||||||||||||||||
Sbjct: 34 ttgaagaaaggaccatggacacctgaagaagatca 68
>29739.m003608 r2r3-myb transcription factor, putative
Length = 267
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 145 tgtggaaagagttgcaggcttagatggataaattacttgaggccagatatcaaaagagg 203
||||| |||||||| || ||||||||| |||| || ||||||||||||||||||||||
Sbjct: 145 tgtggtaagagttgtagacttagatggttaaactatctgaggccagatatcaaaagagg 203
>29933.m001453 r2r3-myb transcription factor, putative
Length = 1107
Score = 58.0 bits (29), Expect = 7e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 256 ggaaacagatggtcgacaatagcagcaaaattaccaggaagaacagacaacgagataaag 315
||||| |||||||| ||||| ||| | |||||||| ||||||||||| ||||| |||||
Sbjct: 253 ggaaatagatggtctacaattgcaactaaattacctggaagaacagataacgatataaaa 312
Query: 316 aattattggcata 328
||| | |||||||
Sbjct: 313 aatcactggcata 325
Score = 52.0 bits (26), Expect = 4e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 130 gcaggtttattaaggtgtggaaagagttgcaggcttagatggataaattacttgaggcca 189
||||| || ||||||| || ||||||||||||||| | ||||| |||||| | ||||||
Sbjct: 127 gcaggcttgttaaggtcagggaagagttgcaggcttcggtggatgaattacctaaggcca 186
Query: 190 gatatcaaaagaggaaacttca 211
||| || |||||||||||||
Sbjct: 187 agtataaagagaggaaacttca 208
>30169.m006454 r2r3-myb transcription factor, putative
Length = 918
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 145 tgtggaaagagttgcaggcttagatggataaattacttgaggcc 188
|||||||||||||||||||| | ||||| ||||||||||||||
Sbjct: 181 tgtggaaagagttgcaggctccgctggatcaattacttgaggcc 224
>29602.m000218 r2r3-myb transcription factor, putative
Length = 801
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 285 attaccaggaagaacagacaacgagataaagaattattgg 324
|||||||||||||||||| || ||||||||||| ||||||
Sbjct: 285 attaccaggaagaacagataatgagataaagaactattgg 324
>29933.m001439 r2r3-myb transcription factor, putative
Length = 1029
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aagaagggaccatggacacctgaagaagatca 68
|||||||| |||||||||||||||||||||||
Sbjct: 37 aagaaggggccatggacacctgaagaagatca 68