Jatropha Genome Database
- JcCB0271581.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0271581.10 + phase: 0
(990 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29804.m001498 DNA binding protein, putative 577 e-164
28179.m000479 DNA binding protein, putative 90 3e-17
28179.m000478 DNA binding protein, putative 52 6e-06
>29804.m001498 DNA binding protein, putative
Length = 930
Score = 577 bits (291), Expect = e-164
Identities = 544/626 (86%), Gaps = 8/626 (1%)
Strand = Plus / Plus
Query: 372 gaaccaaaattatatgttcaaggcttgtcaaggagctaagaggatcaacaccaacaat-- 429
|||||| |||||| | ||||| ||||| ||||||||||||||||| | ||||||||||
Sbjct: 306 gaaccataattatgtattcaacgcttgccaaggagctaagaggattagcaccaacaataa 365
Query: 430 ----ggtagactttctcaaagccaagatcatattatagcagaaagaaagcggcgagagaa 485
|||||| |||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 366 taatggtagaatttctcaaagccaagatcatattatagcagaaaggaaacggcgagagaa 425
Query: 486 gcttagtcaaagattcatagcgttgtctgctatagttcctggtctcaagaagatggacaa 545
||| |||||| | ||||| || || |||||||| |||||||| || ||||||||||| ||
Sbjct: 426 gctcagtcaacggttcattgctttatctgctattgttcctggccttaagaagatggataa 485
Query: 546 ggcttctgttcttggagatgctataaagtacttgaaacaattgcaagagagagttaagac 605
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 486 ggcttctgttcttggagatgctataaagtacttgaaacaattgcaagaaagagttaagac 545
Query: 606 acttgaggagcaaacaaagagaaaaaccatggaatctgtagttattgtgaagaaatctca 665
||| |||||||||||||||| |||||| |||||||| || |||||||||||||||||||
Sbjct: 546 actagaggagcaaacaaagaaaaaaactatggaatcagtggttattgtgaagaaatctcg 605
Query: 666 actgcttttttgtgaggatgatagttcttcctcagatgagagtttctccaaaggcccatt 725
||| | ||| |||| || || | ||||||||||||||| || ||||| |||||||| ||
Sbjct: 606 actagtctttggtgaagaagacacttcttcctcagatgaaagcttctctaaaggcccttt 665
Query: 726 tgatgaaactttaccagaaattgaagcaagaatttgtgacaaacatgttcttataagaat 785
||||| | ||||||||||| ||||||||||| || ||||||||||| |||||||||||
Sbjct: 666 cgatgagccattaccagaaatcgaagcaagaatctgcgacaaacatgtccttataagaat 725
Query: 786 ccattgtgagataaggaaaggagttttggagaaaactatagctgaagtcgagaaactcca 845
||||||||||| |||||||||||| |||||||||| || |||||| | ||||| || ||
Sbjct: 726 ccattgtgagaaaaggaaaggagtactggagaaaacaattgctgaaattgagaagcttca 785
Query: 846 ccttaatatcatcaatagcagtgttcttacttttgggagttctgctcttgatgttactat 905
|||| ||| || |||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 786 cctttcagtcactaacagcagtgttcttacatttggaagttctgctcttgatgttactat 845
Query: 906 tattgctcagatggatagtgaatatgag-atgtcagtgaaagatcttgtgaagaatctac 964
||||||||||||||||| ||||| | || |||||||| || |||||||| ||| ||||||
Sbjct: 846 tattgctcagatggataatgaat-tcagcatgtcagtcaaggatcttgtcaaggatctac 904
Query: 965 actcagctttcaagtttttcatgtga 990
| ||||||||||| || |||||||||
Sbjct: 905 attcagctttcaaattgttcatgtga 930
>28179.m000479 DNA binding protein, putative
Length = 900
Score = 89.7 bits (45), Expect = 3e-17
Identities = 132/161 (81%)
Strand = Plus / Plus
Query: 448 caagatcatattatagcagaaagaaagcggcgagagaagcttagtcaaagattcatagcg 507
||||||||| | |||||||| ||||| || || || |||||||| || ||||||||||
Sbjct: 529 caagatcatgtgatagcagagagaaaacgccgcgaaaagcttagccagcgattcatagct 588
Query: 508 ttgtctgctatagttcctggtctcaagaagatggacaaggcttctgttcttggagatgct 567
| || || | |||||||| || || ||||||||||| || ||||||||||||||||||
Sbjct: 589 ctttcagcagtggttcctggcctgaaaaagatggacaaagcgtctgttcttggagatgct 648
Query: 568 ataaagtacttgaaacaattgcaagagagagttaagacact 608
|| ||||||||||| || || |||||| | || ||||||||
Sbjct: 649 attaagtacttgaagcatttacaagagcgcgtaaagacact 689
>28179.m000478 DNA binding protein, putative
Length = 996
Score = 52.0 bits (26), Expect = 6e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 532 aagaagatggacaaggcttctgttcttggagatgctat 569
|||||||||||||| |||||||| || |||||||||||
Sbjct: 544 aagaagatggacaaagcttctgtcctcggagatgctat 581