Jatropha Genome Database

JcCB0269831.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0269831.10 - phase: 0 
         (537 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29848.m004650 transcription factor hy5, putative                      486   e-137

>29848.m004650 transcription factor hy5, putative
          Length = 510

 Score =  486 bits (245), Expect = e-137
 Identities = 392/441 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaagaacaagcaacaagttcaatcgcggcaaattctctgccatccagcagtgagaga 60
           ||||| || |||||| | ||||| || || || ||||||||||| || |||||||| |||
Sbjct: 1   atgcaggagcaagcatctagttcgattgcagctaattctctgccttctagcagtgaaaga 60

                                                                       
Query: 61  tcttcaagctctgcttttcaacttgaagtcaaagaagggatggagagcgacgaggaaatc 120
           ||||| || |||||| |||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 61  tcttctagttctgctcttcaacttgaagtcaaagaaggtatggagagtgacgaggaaatc 120

                                                                       
Query: 121 aggagagtgccggagatcagtggtgaacccgccggaacttcagcctcaggaagagacgcc 180
           ||||||||||||||| || | |||||||  |||||||| || ||||| ||  | ||||||
Sbjct: 121 aggagagtgccggagttcggcggtgaacaggccggaacctctgcctccggtcgtgacgcc 180

                                                                       
Query: 181 agttcagttgcgggtctagaccgtgtgcaggctccaggggagggccagagtcaaagaaaa 240
           |||||||||||||||| ||| || || ||||||||||||||||| |||| || |||||| 
Sbjct: 181 agttcagttgcgggtcgagatcgagttcaggctccaggggagggtcagactccaagaaag 240

                                                                       
Query: 241 agaggaaggagcccagctgataaagaaaacaaacggctaaagaggttgctgaggaataga 300
           ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 241 agagggaggagcccagctgataaagagaacaagcggctaaaaaggttgctgaggaataga 300

                                                                       
Query: 301 gtttcagctcaacaggcaagggagaggaagaaggcatacttgaatgagttggaaacaaga 360
           ||||||||||| || |||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 301 gtttcagctcagcaagcaagggaaaggaagaaagcatacttgaatgagttggaaacaaga 360

                                                                       
Query: 361 gtcaaagagttggaaaagaaaaactcagagcttgaagaaaggctttccacattgcagaat 420
           |||||||| ||||||||||| ||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 361 gtcaaagacttggaaaagaagaactctgagcttgaagagaggctttccacattacagaat 420

                                
Query: 421 gagaatcagatgcttagacat 441
           |||||||| ||||||||||||
Sbjct: 421 gagaatcaaatgcttagacat 441