Jatropha Genome Database

JcCB0268641.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0268641.10 - phase: 2 /partial
         (566 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29588.m000853 conserved hypothetical protein                          258   3e-68

>29588.m000853 conserved hypothetical protein
          Length = 1659

 Score =  258 bits (130), Expect = 3e-68
 Identities = 364/442 (82%)
 Strand = Plus / Plus

                                                                        
Query: 117  catttccatccaatagtggagcagctattatatgcagtgaaatgacattagtggaaggct 176
            |||||||| |||||||||||| ||||| | ||||||||||||  ||||||||| ||||||
Sbjct: 1091 catttccagccaatagtggaggagctaatgtatgcagtgaaacaacattagtgcaaggct 1150

                                                                        
Query: 177  atgaagtcaaggctagcgttgcacctgtacttagagctatatttgccaagtatggtgata 236
            ||||||| ||| ||||  | ||  || |||| | | | ||||||||||||||||||||||
Sbjct: 1151 atgaagtgaagactagtctggctgctatactgacatccatatttgccaagtatggtgata 1210

                                                                        
Query: 237  tcgctgctaactgccagtacaagtcaccatccgatagggctagtttgcttgaaattgtat 296
            | |||||||||||||| || || |||||  |    ||||| ||||||||||||| ||| |
Sbjct: 1211 ttgctgctaactgccactataaatcaccgacaatgagggcgagtttgcttgaaactgtct 1270

                                                                        
Query: 297  ctgatgttgttcaccgactgcaaagcagtgacattccgctcacactctctgagattagag 356
               || |||||||  | |||||||||| |||||| || ||||| |||||||| |||| ||
Sbjct: 1271 gcaatattgttcaaaggctgcaaagcactgacatgcctctcactctctctgaaattaaag 1330

                                                                        
Query: 357  tcctccaaaatgaaatgaaggatttggagtctacaaggcttaagctttcatggctaaccc 416
            ||||  |||||||||| |||||  |||||  |     ||||||||||||||||||||| |
Sbjct: 1331 tccttaaaaatgaaataaaggacctggagggtgagcagcttaagctttcatggctaactc 1390

                                                                        
Query: 417  agccattagaaaagatttctgaagttgaaaaaattgctgagatgcgttctatgctcaagt 476
            | |||||||||||||| |||||| | ||||| || || ||||||| ||||||||||||||
Sbjct: 1391 aaccattagaaaagatatctgaattcgaaaagatagcagagatgcattctatgctcaagt 1450

                                                                        
Query: 477  cggtgaaagcaaatagcatgatggtgataaaagcagcaactaaggagttggaagaggcac 536
            | || |||||||||||||||||| |  ||||||||||||| |||||| ||||||||| ||
Sbjct: 1451 ctgtaaaagcaaatagcatgatgatcgtaaaagcagcaaccaaggagctggaagaggaac 1510

                                  
Query: 537  ttatggagctagtggcattgca 558
            | |  ||| |||||||||||||
Sbjct: 1511 tcacagagttagtggcattgca 1532