Jatropha Genome Database

JcCB0267821.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0267821.20 + phase: 0 
         (732 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30040.m000262 conserved hypothetical protein                          250   1e-65
29810.m000141 conserved hypothetical protein                           52   5e-06

>30040.m000262 conserved hypothetical protein
          Length = 639

 Score =  250 bits (126), Expect = 1e-65
 Identities = 302/360 (83%), Gaps = 3/360 (0%)
 Strand = Plus / Plus

                                                                       
Query: 376 caagatatgggaatgggtctagttaggattgctttggagtgtgaaaagagaaggaacgag 435
           ||||||||||||||||| || |||||| |||| |||||||| |||||||    | |||||
Sbjct: 280 caagatatgggaatggggctggttagggttgcattggagtgcgaaaagaagccgcacgag 339

                                                                       
Query: 436 aaaacaaagattatagaagagccaatatggacaatgtattgtaatggaaggaaatcaggt 495
           || || ||||| ||||| || || ||||||||||||||||| || ||||| ||  |||| 
Sbjct: 340 aagactaagatcatagatgaacctatatggacaatgtattgcaacggaagaaagacaggg 399

                                                                       
Query: 496 tatggggtaaagagagaaccgacagatgaagatttggtagtaatgcaaatattgcatgtg 555
           |||||||| |||||||  || |||||||||||||||||||||||||||||  ||||||||
Sbjct: 400 tatggggtgaagagagcgccaacagatgaagatttggtagtaatgcaaatcctgcatgtg 459

                                                                       
Query: 556 atatctatgggagctggggttataccggaggacgg---agatcatctggacggagaacta 612
           ||||| ||||| ||||| || || ||||| || ||   ||| || | ||| || ||| ||
Sbjct: 460 atatcaatgggtgctggagtgattccggatgatggaacagagcagccggatggtgaatta 519

                                                                       
Query: 613 acgtacatgagagcacattttgaacgcgtagttgggtctaaagattcagagacctattac 672
           ||||||||| |||| ||||||||||| ||  |||||||||||||||| || || ||||| 
Sbjct: 520 acgtacatgcgagcccattttgaacgagtcattgggtctaaagattcggaaacatattat 579

                                                                       
Query: 673 atgatgaatcctgatgggaataatggaccagaattaaccattttctttgtgaggatttga 732
           ||||||||||||||||||||||  ||||| ||||||| |||||||||||| |||||||||
Sbjct: 580 atgatgaatcctgatgggaatagcggacctgaattaagcattttctttgtcaggatttga 639


>29810.m000141 conserved hypothetical protein
          Length = 666

 Score = 52.0 bits (26), Expect = 5e-06
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 456 gccaatatggacaatgtattgtaatggaaggaaa 489
           |||| ||||||| |||||||||||||||||||||
Sbjct: 450 gccagtatggactatgtattgtaatggaaggaaa 483