Jatropha Genome Database
- JcCB0267561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0267561.10 - phase: 0 /pseudo/partial
(1296 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29790.m000842 conserved hypothetical protein 1199 0.0
30138.m003914 conserved hypothetical protein 163 3e-39
29813.m001534 conserved hypothetical protein 60 4e-08
>29790.m000842 conserved hypothetical protein
Length = 1509
Score = 1199 bits (605), Expect = 0.0
Identities = 1016/1153 (88%)
Strand = Plus / Plus
Query: 144 gatatgtgatatggttaccattgctagatatctaaatgtaactcttattgtcccggagtt 203
||||||||| |||||| | ||||| ||||||||||||||||| ||| |||| || |||||
Sbjct: 354 gatatgtgacatggttgctattgcaagatatctaaatgtaacccttgttgtgccagagtt 413
Query: 204 ggataaaacctcattttggaatgacccaagtgagtttcaagacatatttgatgttaatca 263
||||||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||
Sbjct: 414 ggataaatcctcattttggaatgacccaagtgagttccaagacatatttgatgttgacca 473
Query: 264 tttcatcacttccttgaaagatgaggttcgtatattgaaagagctaccgcctagaatcaa 323
||||||||||||||||| |||||||||||||||| ||||||||||||| || || |||||
Sbjct: 474 tttcatcacttccttgagagatgaggttcgtatactgaaagagctaccacccaggatcaa 533
Query: 324 acgaagagttgaattggggatgttctactcactgccgccagttagttggtcaaatttatc 383
| || |||||||| |||| |||||||||||| |||| || |||||||||| || ||||
Sbjct: 534 aagacgagttgaactgggaatgttctactcattgccacccattagttggtcgaacatatc 593
Query: 384 ttactacctacatcagattcttcctctggtgcaaaagtacaaagtagtccatttgaataa 443
||||||||| ||||||||||| ||||||||||| |||||||| | | |||||||||||
Sbjct: 594 ttactaccttcatcagattctacctctggtgcagaagtacaagattatacatttgaataa 653
Query: 444 aactgattctcgtcttgctaacaatggactacctcttgaaattcaaaagttgcgttgccg 503
|| ||| | ||||||||||| ||||||||||||||| | ||||| |||||||| |||||
Sbjct: 654 gaccgatgcccgtcttgctaataatggactacctcttcagattcagaagttgcgctgccg 713
Query: 504 tgtaaattttaatgctctgagatttacaccacagatagaggagttgggtagaagggtggt 563
||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| ||
Sbjct: 714 tgtaaattttaatgctctgaggtttacaccacagatagaagaattgggcagaagggttgt 773
Query: 564 tagaatgttgagggagaaaggccccttccttgtccttcatcttcgatatgaaatggatat 623
|| || || ||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 774 aaggattttaagggagaaaggcccctttctcgtccttcatctaagatatgaaatggatat 833
Query: 624 gttggcgttttccggctgcactcaaggttgcaacagtgaggaggttgaggaactgaccag 683
|||||| || || ||||||||||||||||||||| ||||||| ||||||||||||| ||
Sbjct: 834 gttggctttctcaggctgcactcaaggttgcaacgatgaggagattgaggaactgacaag 893
Query: 684 aatgagatatgcttacccctggtggaaggaaaaagttataaattctgaaatgaagaggaa 743
||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||
Sbjct: 894 aatgagatatgcttacccctggtggaaggaaaaagttataaattctggactgaaaaggag 953
Query: 744 agaaggttggtgtcctttgacgcctgaggaaactgctcttgtattaagcgcactgggaat 803
|||||| | ||| |||||||| ||||||||||||||||| |||||||| ||||| || ||
Sbjct: 954 agaaggcttgtgccctttgacacctgaggaaactgctctggtattaagtgcactaggcat 1013
Query: 804 tgatcataatattcaaatttatattgctgctggagaaatatatggtggagaaaaaagaat 863
|||||||||| ||||||| || |||||| |||||||||||||||||||||||| ||||||
Sbjct: 1014 tgatcataatgttcaaatatacattgcttctggagaaatatatggtggagaaagaagaat 1073
Query: 864 gaagactttggcagcaaccttcccaaatgtggttaggaaagagactctgctggaatcatc 923
|||||||||| ||||||| ||||| |||||||| |||||||| ||||| |||||||||||
Sbjct: 1074 gaagactttgtcagcaactttccctaatgtggtcaggaaagaaactctactggaatcatc 1133
Query: 924 agatttgaagtttttccaaaaccactcatcccaaatggcagcattggattatcttgtgtc 983
|||||||||||| || || |||||||| || || |||||||||||||||||||| || ||
Sbjct: 1134 agatttgaagttctttcagaaccactcctctcagatggcagcattggattatctggtatc 1193
Query: 984 actggagggtgacatatttgttcctacatatgatggcaatatggctaaagtagtggaagg 1043
||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 1194 cctggaaggtgacatatttgttcctacatatgatggcaatatggctaaagttgttgaagg 1253
Query: 1044 ccatcgcagatttttaggcttcaaaaagacaatctcattggacagaaagcttctagttgg 1103
||||||||| || ||||| ||||| ||||| || || |||||||||||||||||| ||||
Sbjct: 1254 ccatcgcaggttcttaggattcaagaagactatttcgttggacagaaagcttctaattgg 1313
Query: 1104 tttaatagatcaatacaacaagggatcattgagttgggatgaattctctaccactctaaa 1163
|||||||||| |||| ||||||||||||||| |||||||| |||||||| ||| | ||
Sbjct: 1314 cctaatagatcagtacagcaagggatcattgagctgggatgagttctctactactgtgaa 1373
Query: 1164 gcaagttcatgcagatcgaatggggaatccgaagacaagagttgtcataccagataaacc 1223
| || |||||| ||||| ||||||| ||| ||| | ||||||||||| ||||||| ||
Sbjct: 1374 ggaaactcatgctgatcggatggggagtcccaaggctcgagttgtcatagcagataagcc 1433
Query: 1224 aaaggaagaagattatttctatgcaaatccacacgagtgtttgcaactgttagatgaaac 1283
|||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||| |
Sbjct: 1434 caaggaagaggattatttctatgccaatccacatgagtgtttgcagttgttagatgaacc 1493
Query: 1284 atggagtagcaca 1296
|| ||||||||||
Sbjct: 1494 attgagtagcaca 1506
Score = 115 bits (58), Expect = 7e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 35 gggtttataagaataatgggtatcttatggtttcctgcaatggaggactcaaccaaat 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gggtttataagaataatgggtatcttatggtttcctgcaatggaggactcaaccaaat 344
>30138.m003914 conserved hypothetical protein
Length = 1533
Score = 163 bits (82), Expect = 3e-39
Identities = 508/650 (78%)
Strand = Plus / Plus
Query: 397 cagattcttcctctggtgcaaaagtacaaagtagtccatttgaataaaactgattctcgt 456
|||||||||||| || | ||||||||||| || | ||| |||| | ||||||| ||||
Sbjct: 622 cagattcttcctttgatacaaaagtacaaggtcttacatctgaacagaactgatgctcga 681
Query: 457 cttgctaacaatggactacctcttgaaattcaaaagttgcgttgccgtgtaaattttaat 516
||||| || ||| | |||| | || ||||| ||||||||||||||||| ||||||| |
Sbjct: 682 cttgccaataatcatcaacctttggagattcagaagttgcgttgccgtgtgaattttagt 741
Query: 517 gctctgagatttacaccacagatagaggagttgggtagaagggtggttagaatgttgagg 576
||| |||||||||| | |||||||||||| |||| | ||| || | | | | |||
Sbjct: 742 gctttgagatttacctctcagatagaggagctgggcaaaagagttataaagcttcttagg 801
Query: 577 gagaaaggccccttccttgtccttcatcttcgatatgaaatggatatgttggcgttttcc 636
| || || || || | |||||||||||| ||||||||||||| |||||||| |||||
Sbjct: 802 caaaatggtccatttttagtccttcatcttagatatgaaatggacatgttggccttttct 861
Query: 637 ggctgcactcaaggttgcaacagtgaggaggttgaggaactgaccagaatgagatatgct 696
||||| || || ||||| |||| ||||||||| || ||| | || |||||||||||||||
Sbjct: 862 ggctgtacccagggttgtaacaatgaggaggtagaagaattaacaagaatgagatatgct 921
Query: 697 tacccctggtggaaggaaaaagttataaattctgaaatgaagaggaaagaaggttggtgt 756
|| || |||||||| || ||| | ||||||||||| |||| |||||||| |||| ||
Sbjct: 922 tatccttggtggaaagagaaaataataaattctgacttgaaaaggaaagatggtttatgc 981
Query: 757 cctttgacgcctgaggaaactgctcttgtattaagcgcactgggaattgatcataatatt 816
|||||||| || |||||||| |||||| ||| || ||| ||| ||||||| ||||
Sbjct: 982 cctttgacaccagaggaaacagctcttacattgagggcattggacattgatccagatatg 1041
Query: 817 caaatttatattgctgctggagaaatatatggtggagaaaaaagaatgaagactttggca 876
|| ||||| ||||| || || ||||| ||||||||||| | |||||| | | | ||
Sbjct: 1042 cagatttacattgcagcaggtgaaatttatggtggagataggagaatggcaagtcttgcg 1101
Query: 877 gcaaccttcccaaatgtggttaggaaagagactctgctggaatcatcagatttgaagttt 936
||| | || || || |||| || || || || ||| ||||| ||| ||| | | ||||
Sbjct: 1102 gcagcttttcccaaactggtcagaaaggaaaccctgttggaaccattagaccttaggttt 1161
Query: 937 ttccaaaaccactcatcccaaatggcagcattggattatcttgtgtcactggagggtgac 996
|| || || ||||| ||||| ||||||||||| ||||||||||| || ||||| ||||
Sbjct: 1162 tttcagaatcactcgtcccagatggcagcattagattatcttgtttctttggagagtgat 1221
Query: 997 atatttgttcctacatatgatggcaatatggctaaagtagtggaaggcca 1046
|| ||||| || ||||||||||| || ||||||||||| || ||||||||
Sbjct: 1222 atttttgtcccaacatatgatggaaacatggctaaagttgttgaaggcca 1271
Score = 71.9 bits (36), Expect = 9e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 35 gggtttataagaataatgggtatcttatggtttcctgcaatggaggactcaaccaaattg 94
||||||| ||||| ||||| |||||||||||||| ||||||||||| ||||| |||| ||
Sbjct: 302 gggtttacaagaacaatggatatcttatggtttcatgcaatggaggtctcaatcaaa-tg 360
Query: 95 agagcagc 102
||||||||
Sbjct: 361 agagcagc 368
>29813.m001534 conserved hypothetical protein
Length = 1563
Score = 60.0 bits (30), Expect = 4e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1004 ttcctacatatgatggcaatatggctaaagtagtggaaggccatcgcagatttttaggct 1063
|||| ||||||||||| |||||||| ||||| |||||||| |||||| | | | | ||||
Sbjct: 1199 ttcccacatatgatggaaatatggcaaaagttgtggaaggtcatcgccggtatcttggct 1258
Query: 1064 tcaaaaagacaatc 1077
| ||||||||||||
Sbjct: 1259 ttaaaaagacaatc 1272