Jatropha Genome Database

JcCB0259591.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0259591.30 - phase: 0 /partial
         (282 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29942.m000737 hypothetical protein                                    111   2e-24

>29942.m000737 hypothetical protein
          Length = 339

 Score =  111 bits (56), Expect = 2e-24
 Identities = 173/212 (81%)
 Strand = Plus / Plus

                                                                       
Query: 43  tttgaagatgcgaagaacgcttgctgtgggcttggtctgcacggtgtggctataggttgt 102
           ||||||||| | ||||| |||||||||||||| ||| |||| ||||    |||  |||||
Sbjct: 115 tttgaagattcaaagaatgcttgctgtgggctcggtttgcatggtgcaattatcagttgt 174

                                                                       
Query: 103 ctttctgtagagatgtcctgcaaccaaccttcagcttatgtgtggtgggatctctataac 162
           ||||| | ||  ||| ||||||| || ||||| |||| ||| ||||||||||||||||| 
Sbjct: 175 ctttcagcagcaatggcctgcaatcagccttctgcttttgtctggtgggatctctataat 234

                                                                       
Query: 163 ccttcaaaagcagtgaactcttttcttgctgatgctgcttggtctggctacaccttgtct 222
           |||||| ||  ||| |||||||||||||||||| | || ||||||||| | | |||||||
Sbjct: 235 ccttcacaaagagttaactcttttcttgctgattcagcatggtctggccagagcttgtct 294

                                           
Query: 223 ggtatttgccatcctatgacagtccaggatct 254
           || |||||   |||||| ||||| ||||||||
Sbjct: 295 ggcatttgtagtcctattacagttcaggatct 326