Jatropha Genome Database

JcCB0252381.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0252381.10 - phase: 1 /partial
         (485 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013804 cinnamoyl-CoA reductase, putative                       220   6e-57

>30170.m013804 cinnamoyl-CoA reductase, putative
          Length = 963

 Score =  220 bits (111), Expect = 6e-57
 Identities = 380/470 (80%), Gaps = 6/470 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   agaactggtattttcctgcgaagacagctgcagaaaaggaggcttgggaatgtgcaaaga 63
           ||||||||||||| | | | ||||| ||||||||||| || ||||||| || ||||||| 
Sbjct: 470 agaactggtatttcctttctaagactgctgcagaaaaagaagcttgggcatttgcaaagc 529

                                                                       
Query: 64  ggagtaatctgaacgtgatcactgtttgtccgtccctaattatagggccattgctgcagc 123
           || |||| || ||| |  | || ||||||||  | ||||| ||||||||| |||||||||
Sbjct: 530 ggtgtaacctaaacatcttaacagtttgtcctgctctaatcatagggccactgctgcagc 589

                                                                       
Query: 124 caaccatgaacgccacttgcttatatctcctaaacttattgaaagatggatctgagctag 183
           |||| ||||| |||||| ||||| | |||||| |  | |||| |||||| |||||   ||
Sbjct: 590 caacaatgaatgccactagcttacacctcctacagctcttgagagatggctctgaatcag 649

                                                                       
Query: 184 tagagaacagaaccactcctcatgttgatgtgcgcgatgcagcagaatcgctgctgctag 243
           |||| ||| | | || |||| |||| |||||||| |||||||||||||| ||  || |||
Sbjct: 650 tagataacgggatcattccttatgtagatgtgcgtgatgcagcagaatcactcttgatag 709

                                                                       
Query: 244 tatatgagaagcctgaagcagagggaagatacatatgttcatctcatgagatttcaactc 303
           |||||||||| |||||||||||||||||||||||||||||||| || |||||   |||||
Sbjct: 710 tatatgagaatcctgaagcagagggaagatacatatgttcatcacacgagatgagaactc 769

                                                                       
Query: 304 aagatttggtggataagttgaagctgatgtatccccaatacaactatccgaaa------a 357
           |||| ||| |  | || |||||| ||||||||||||| |||||||||||||||      |
Sbjct: 770 aagacttgattaacaaattgaagttgatgtatccccattacaactatccgaaaagttata 829

                                                                       
Query: 358 gtgaagggatggtgtggacgagggtgagttcaagaaagttgcaagatttgggatggaaat 417
           ||| ||  | | |||   | | |||||||||||  |||||||||||||| ||||||||||
Sbjct: 830 gtggagaaaggatgttagcaaaggtgagttcaaataagttgcaagatttaggatggaaat 889

                                                             
Query: 418 acaggcaattggaagagacaatcactgatgctgtcaagaattatgaagag 467
           | |||| | |||| |||||| | | ||||||||| |||||||||||||||
Sbjct: 890 ataggccaatggatgagacacttattgatgctgtgaagaattatgaagag 939