Jatropha Genome Database

JcCB0252341.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0252341.20 - phase: 1 /pseudo/partial
         (196 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29854.m001123 conserved hypothetical protein                          100   6e-21

>29854.m001123 conserved hypothetical protein
          Length = 156

 Score = 99.6 bits (50), Expect = 6e-21
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                       
Query: 131 caagctcgcatcaaagctcgaaatgattttgttaaggaacgattgcgaaagaaacatggc 190
           |||||||| |||||||||||||||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 88  caagctcgaatcaaagctcgaaatgattttgttaaagaacgtttgagaaagaaacatggc 147

                 
Query: 191 aaagga 196
           ||||||
Sbjct: 148 aaagga 153