Jatropha Genome Database

JcCB0250281.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0250281.10 + phase: 0 /pseudo/partial
         (594 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006331 Potassium transporter, putative                         135   3e-31

>30169.m006331 Potassium transporter, putative
          Length = 2199

 Score =  135 bits (68), Expect = 3e-31
 Identities = 199/242 (82%), Gaps = 3/242 (1%)
 Strand = Plus / Plus

                                                                        
Query: 351  agtgagctttcaatta---acttgggaagcaaataaagaggttggagaactgatggaagc 407
            ||||||||||||||||   | || |||||||||| | ||| ||  || ||||||||| ||
Sbjct: 1950 agtgagctttcaattacataatttggaagcaaatgaggagattaaaggactgatggaggc 2009

                                                                        
Query: 408  aaaagaagctggtgtctcttacatgatgagcaatataagtgtcagagccagtgaagcatc 467
             || ||||| || ||  | |||||||||||||||| |||||| ||||| | ||| |||||
Sbjct: 2010 gaaggaagcaggcgtagcgtacatgatgagcaatacaagtgtgagagcaaatgaggcatc 2069

                                                                        
Query: 468  gtcttttctgaagaaatttgccattgacattgtgtatgattttctcagacgcaatagcag 527
             |||||| | ||||| ||||||||| | ||||||||||  ||||| |||||||||||| |
Sbjct: 2070 atcttttgtaaagaagtttgccattaatattgtgtatgcgtttcttagacgcaatagccg 2129

                                                                        
Query: 528  gtgccctgcaacttcacttgggcttccacacgcctccctcattcaagtgggtatggttta 587
            ||||||||||||| |||||||| |||||||| | ||  | ||| ||||||| ||||||||
Sbjct: 2130 gtgccctgcaactgcacttgggattccacacccttcattgattgaagtgggcatggttta 2189

              
Query: 588  tc 589
            ||
Sbjct: 2190 tc 2191



 Score =  129 bits (65), Expect = 2e-29
 Identities = 173/209 (82%)
 Strand = Plus / Plus

                                                                        
Query: 11   gttcctggaatttgccttgtttactctgatgttacatctggtgttcccccaatgttctct 70
            ||||||||||||||||| ||||| || ||| |||| |||||||| || ||||||||  ||
Sbjct: 1588 gttcctggaatttgcctagtttattccgatattacttctggtgtcccgccaatgtttgct 1647

                                                                        
Query: 71   catttcgtcactaactttcctgcattccatcaaattctcatatttgtaactcttcagtct 130
            |||||| | || || ||||||||||| ||| ||||||||||||| || || |||||||||
Sbjct: 1648 catttcataaccaattttcctgcatttcatgaaattctcatattcgtcacccttcagtct 1707

                                                                        
Query: 131  gtgatgatcccaaaagttccacctggcgaacgttttcatgttgcgagagttggaccccca 190
             ||||||| |||||||| ||   ||  |||||||| ||  ||| |||  ||||||| |||
Sbjct: 1708 ttgatgataccaaaagtaccgattgatgaacgtttccacattgtgaggattggacctcca 1767

                                         
Query: 191  gagttctccctattccgctgcattgtcag 219
            || ||||| |||||||| |||||||||||
Sbjct: 1768 gaattctctctattccggtgcattgtcag 1796