Jatropha Genome Database

JcCB0249501.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0249501.20 + phase: 0 /pseudo/partial
         (203 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014177 clathrin coat assembly protein ap17, putative           163   5e-40

>30170.m014177 clathrin coat assembly protein ap17, putative
          Length = 429

 Score =  163 bits (82), Expect = 5e-40
 Identities = 97/102 (95%)
 Strand = Plus / Plus

                                                                       
Query: 3   gatccgattcatacttctgcagaacaggcaaggcaagactcgtctcgccaaatactatgt 62
           |||||| ||||||||  |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3   gatccggttcatactattgcaaaacaggcaaggcaagactcgtctcgccaaatactatgt 62

                                                     
Query: 63  tcctctcgaggattccgagaagcataaagtcgaatacgaggt 104
           |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 63  tcctctcgaggattccgagaagcacaaagtcgaatacgaggt 104