Jatropha Genome Database

JcCB0249431.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0249431.10 + phase: 0 /partial
         (588 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29589.m001265 superoxide dismutase [cu-zn], putative                  349   1e-95

>29589.m001265 superoxide dismutase [cu-zn], putative
          Length = 642

 Score =  349 bits (176), Expect = 1e-95
 Identities = 302/344 (87%)
 Strand = Plus / Plus

                                                                       
Query: 235 aatgttgaaggcgttgtcactttgacccaggaagacgatggtcccacaacagtgaatgtt 294
           ||||||||||||||||| |||||||| || | ||| ||||| |||||||| |||||||||
Sbjct: 217 aatgttgaaggcgttgttactttgactcaaggagatgatggccccacaactgtgaatgtt 276

                                                                       
Query: 295 cgtgtcactggccttactccagggcctcatggattccacctacatgagtatggtgacaca 354
           ||  |||| || ||||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 277 cgaatcaccggtcttactccaggacttcatgggttccacctacatgagtatggtgacaca 336

                                                                       
Query: 355 acaaatggatgcatttctacaggagctcatttcaatccgaacaacaagacacatggtgct 414
           |||||||||||||| || ||||| || ||||||||||| ||   |  ||||||||||  |
Sbjct: 337 acaaatggatgcatgtcaacaggggcacatttcaatcctaagggcttgacacatggtagt 396

                                                                       
Query: 415 cctgaagatgaaatccgtcatgcgggtgacctgggaaacatagttgctaacgctgatggg 474
           ||||||||||| ||||| |||||||| ||||||||||||||||| ||||| |||||||| 
Sbjct: 397 cctgaagatgatatccgccatgcgggcgacctgggaaacatagtagctaatgctgatggt 456

                                                                       
Query: 475 gtggcagaagcaacaattgtggataaccagataccattgagtggtccaaatgcagtagtc 534
           || |||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||| | 
Sbjct: 457 gtagcagaagctacaattgtggatagccagataccgttgagtggtcctaatgcagtaatt 516

                                                       
Query: 535 ggaagagcacttgttgtccatgagcttgaagatgaccttggaaa 578
           |||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 517 ggaagagcgcttgttgtccacgagcttgaggatgaccttggaaa 560