Jatropha Genome Database

JcCB0248161.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0248161.10 - phase: 0 
         (522 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29938.m000611 Transcriptional factor TINY, putative                    82   4e-15

>29938.m000611 Transcriptional factor TINY, putative
          Length = 501

 Score = 81.8 bits (41), Expect = 4e-15
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                       
Query: 250 gacatatcccctacgtctatacagaaagcagcttcagatgctggcatggcggttgatgcg 309
           ||||| ||||||| ||||||||||||| | || || ||||||||||||||| ||||||| 
Sbjct: 241 gacatgtcccctaagtctatacagaaatctgcatccgatgctggcatggcgattgatgca 300

                            
Query: 310 cagatgataatgaacag 326
           ||||||||| |||||||
Sbjct: 301 cagatgatactgaacag 317



 Score = 63.9 bits (32), Expect = 9e-10
 Identities = 101/124 (81%)
 Strand = Plus / Plus

                                                                       
Query: 64  aagtgggggaaatgggtgtcggagataagagttcccggaacacaagggcggctctggtta 123
           ||||||||||||||||||||||| ||  | ||||| || || || |  ||||| ||||||
Sbjct: 64  aagtgggggaaatgggtgtcggaaattcgcgttccgggcacgcaggaacggctgtggtta 123

                                                                       
Query: 124 ggttcttattcttccccggaggcagctgcggtggctcatgatatagcttcttattgttta 183
           |||||||||||| |  | |||||||| || ||||| || ||| | ||||| ||||| |||
Sbjct: 124 ggttcttattctactgctgaggcagccgctgtggcacacgatgtggcttcctattgctta 183

               
Query: 184 agag 187
           ||||
Sbjct: 184 agag 187