Jatropha Genome Database

JcCB0244361.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0244361.30 + phase: 2 /pseudo/partial
         (312 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29577.m000452 strictosidine synthase, putative                        242   1e-63

>29577.m000452 strictosidine synthase, putative
          Length = 1119

 Score =  242 bits (122), Expect = 1e-63
 Identities = 245/286 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtcagagaagctatgttctagaggagttgactcaaccacatcgaagcaatggaagtatga 60
           |||||||||| | ||  ||| ||||||||||||||||||| | |||||||||||| | ||
Sbjct: 267 gtcagagaagatttgcgctaaaggagttgactcaaccacagcaaagcaatggaagcacga 326

                                                                       
Query: 61  gagagtgtgtggtcgtccacttgggctaaggtttgacaaaaagactggaaatttatacat 120
           || |  |||||||||||||||||| |||||||| |||||||| ||||||||| | ||| |
Sbjct: 327 gaaaaggtgtggtcgtccacttggcctaaggttcgacaaaaacactggaaatctgtacgt 386

                                                                       
Query: 121 tgctgatgcttactatggccttatggttgttggaccagaaggaggacttgccattccttt 180
           ||||||| |||| ||||| ||| ||||| ||||||| ||||||||||||||||  |||||
Sbjct: 387 tgctgattcttattatggtcttctggttattggacctgaaggaggacttgccaagccttt 446

                                                                       
Query: 181 ggcaactcatgcaggagggaagcctattctgtttgctaatgatcttgacttgcatgaaaa 240
           ||||||||| | ||  |||||||| || || ||||| |||||||||||| | ||||||||
Sbjct: 447 ggcaactcaagtagctgggaagccaatactctttgccaatgatcttgacatacatgaaaa 506

                                                         
Query: 241 tggctctatcttctttacagacactagcaagagatatgacagagtg 286
           ||| || || ||||||||||| || |||||||||||||||||||||
Sbjct: 507 tggatccattttctttacagataccagcaagagatatgacagagtg 552