Jatropha Genome Database

JcCB0244361.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0244361.10 + phase: 0 /partial
         (374 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29577.m000452 strictosidine synthase, putative                         72   3e-12

>29577.m000452 strictosidine synthase, putative
          Length = 1119

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 117/144 (81%)
 Strand = Plus / Plus

                                                                       
Query: 127 catgatttcaggcctgtgaagcatgaggttgcaccgtacaagaaagtgatgggaagctgg 186
           ||||| |||||||||||  ||||||| |||||||| || ||| |||| |||| || ||||
Sbjct: 19  catgacttcaggcctgttgagcatgatgttgcaccttataagcaagttatggaaaactgg 78

                                                                       
Query: 187 ccgagagacgagaaaggtagattgggaaatggaaagttggagtttgtgaacgaagttttt 246
           || |||||  || |||  ||| | |||| ||| ||  ||||||||||  | |||||||||
Sbjct: 79  ccaagagataaggaagcgagactaggaactgggaaactggagtttgttgatgaagttttt 138

                                   
Query: 247 ggtcctgaatctttggagtttgat 270
           || |||||||| ||||||||||||
Sbjct: 139 ggccctgaatccttggagtttgat 162