Jatropha Genome Database
- JcCB0242921.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0242921.10 - phase: 1 /pseudo
(557 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29929.m004704 transcription factor, putative 624 e-178
>29929.m004704 transcription factor, putative
Length = 1197
Score = 624 bits (315), Expect = e-178
Identities = 480/535 (89%)
Strand = Plus / Plus
Query: 3 agtggcaggccatctctcaaccttgaaagacgtctggatcatgacggacatcctcttgcc 62
|||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 640 agtggcaggccaactctcaaccttgaaagacgtctagatcatgatggacatcctcttgcc 699
Query: 63 atcacagcacctgatgcagttgcagcaagtggagttcctccatggaattggagggagact 122
||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 700 atcaccgcagctgatgcagttgcagcaagtggagttcctccttggaattggagggagacc 759
Query: 123 cctggaaatggtcctgagaatcagtcatttggtgggagagtgataactgtcaagtatttg 182
||||||| |||| | ||| ||| ||||||||||||||||||||||| || ||||||
Sbjct: 760 cctggaagtggtgccgagggtcaatcatttggtgggagagtgataacagtgaagtatgga 819
Query: 183 gactatacaagaagggtaggtgttgatggcaccacagatgccatcaaggaggcaatcaag 242
|||||||||||||| | ||| ||||||| || |||||||||||| ||||||| |||||
Sbjct: 820 gactatacaagaagaattggtattgatggtactgcagatgccatcagggaggcagtcaag 879
Query: 243 tcagctttcagattaaggaccaaacgtgcattttggttggaggatgaagaccagataatt 302
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 880 tcagctttcagattaaggactaaacgtgcattctggttggaggatgaagaccagataatt 939
Query: 303 cgtagtcttgacagagacatgccagtggggaattacacacttcaccttgatgaaggatta 362
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 940 cgtagtcttgacagggacatgcctgtggggaattacacacttcaccttgatgaaggatta 999
Query: 363 gccgtcaaagtgtgtctatatgatgaatcagaccacatgccagtacatacggaggaaaaa 422
|| |||||||||| || |||||||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 1000 gctatcaaagtgtgcctgtatgatgagtcagaccacataccagtgcatactgaggaaaaa 1059
Query: 423 gttttctacactgaagatgactaccgtgattttttgactcgccgtggctggacatgccta 482
|||||||||||||||||||||||| | || ||| || ||| || |||||||||||||||
Sbjct: 1060 gttttctacactgaagatgactacagagaatttctggttcgtcgaggctggacatgccta 1119
Query: 483 agggagtttgatgggtatagaaatgttgataacatggatgaccttcgacccggtg 537
||||| ||||| || |||||||| | |||||||||||||| |||||||| ||||
Sbjct: 1120 agggaatttgacggttatagaaacatcgataacatggatgatcttcgacctggtg 1174