Jatropha Genome Database
- JcCB0242111.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0242111.10 - phase: 2 /partial
(685 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014419 Transcription factor ICE1, putative 769 0.0
30131.m006993 conserved hypothetical protein 194 5e-49
>30147.m014419 Transcription factor ICE1, putative
Length = 1650
Score = 769 bits (388), Expect = 0.0
Identities = 610/682 (89%), Gaps = 4/682 (0%)
Strand = Plus / Plus
Query: 1 agttcacggagaa-actaaaatggaggagattggcaaaaatggagggaatagctctaatg 59
||||||| ||||| ||||| || ||||||||||| |||||||| ||||||||||| ||||
Sbjct: 959 agttcactgagaatactaagatagaggagattggtaaaaatggtgggaatagctcaaatg 1018
Query: 60 caaatagcagtgtcactggc---ggcggtggagatcagaaggggaagaagaaggggcttc 116
| |||||| | ||||||| || ||||| |||||||| |||||||||||||||||||
Sbjct: 1019 cgaatagcgatatcactggttgtggtggtggtgatcagaaagggaagaagaaggggcttc 1078
Query: 117 ctgctaaaaatttgatggcagaaaggaggcgccggaagaagctcaatgataggttatata 176
||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 1079 ctgctaagaatctgatggcagaaaggaggcgccggaagaagcttaatgataggttataca 1138
Query: 177 tgcttaggtctgtagttccaaagattagcaagatggacagggcatcaatacttggggatg 236
|| | |||||||| || ||||| || ||||||||||| ||||||||||| ||||| ||||
Sbjct: 1139 tgttaaggtctgttgtaccaaaaataagcaagatggatagggcatcaatccttggagatg 1198
Query: 237 caattgagtacttgaaggaacttctgcaaaggatcaatgacctacataatgaattggagt 296
|||| || |||||||| || ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1199 caatcgaatacttgaaagagcttctgcaaaggatcaatgacctccataatgaattggagt 1258
Query: 297 ccactcctcctggctcttctttgacacccaccacaagttttcaccctttgacgcccactc 356
| ||||||||||||||||| |||||||||||||||| ||||| |||||||| |||||||
Sbjct: 1259 caactcctcctggctcttcaatgacacccaccacaagctttcatcctttgacacccactc 1318
Query: 357 catcagcccttcccagccgtatcaaggataagctttgcccaacctcattgccaagtccaa 416
|||||||||| ||||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1319 catcagccctgcccagccgtatcaaggataagctttgccccagcccattgccaagtccaa 1378
Query: 417 atggtcaaccggcaagggttgaagtgagagtgagagaaggaagagctgtaaacatacaca 476
|||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| || |
Sbjct: 1379 atggtcaaccagcaagggttgaagtcagattgagagaaggaagagctgtaaacatccata 1438
Query: 477 tgttttgcagtcgaagagcaggtctcctgctctccactatgagggctttggataaccttg 536
||||||| |||| ||| | || ||||||||||||| |||||||||||||||||||| |
Sbjct: 1439 tgttttgtggtcgcagaccgggcctcctgctctccatcatgagggctttggataacctcg 1498
Query: 537 gcctagacatccagcaagctgtcatcagttgtttcaatggttttgccatggatatctttc 596
|||| || || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 gcctggatattcagcaagctgtcatcagttgtttcaatggttttgccatggatatctttc 1558
Query: 597 gagctgagcaatgtaaagaagggcaagatgttcatcctgagcaaataaaagcagtgcttc 656
||||||||||||| |||||||| || ||||| ||||| ||||||||||||||||| |||
Sbjct: 1559 gagctgagcaatgcaaagaaggacaggatgtgcatcccgagcaaataaaagcagtacttt 1618
Query: 657 tggattcagctggcttccatgg 678
|||||||||| |||| ||||||
Sbjct: 1619 tggattcagccggctaccatgg 1640
>30131.m006993 conserved hypothetical protein
Length = 1287
Score = 194 bits (98), Expect = 5e-49
Identities = 476/602 (79%)
Strand = Plus / Plus
Query: 77 ggcggcggtggagatcagaaggggaagaagaaggggcttcctgctaaaaatttgatggca 136
|||||| |||| ||||| |||||||||||||| ||| | ||||| || |||||||||||
Sbjct: 676 ggcggcagtggtgatcaaaaggggaagaagaaagggatgcctgcaaagaatttgatggct 735
Query: 137 gaaaggaggcgccggaagaagctcaatgataggttatatatgcttaggtctgtagttcca 196
|| || ||| | |||||| || ||||||||| | ||||||||||| ||||| || ||
Sbjct: 736 gagagaaggaggaggaagagactaaatgataggctttatatgcttagatctgttgtaccc 795
Query: 197 aagattagcaagatggacagggcatcaatacttggggatgcaattgagtacttgaaggaa 256
||||||||||||||||| || || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 796 aagattagcaagatggatagagcttcaattcttggggatgccattgattacttaaaggag 855
Query: 257 cttctgcaaaggatcaatgacctacataatgaattggagtccactcctcctggctcttct 316
|||||||| || ||||||||||| || |||||||||||||| || |||||||| ||||
Sbjct: 856 cttctgcagagaatcaatgaccttcacaatgaattggagtcaacacctcctggttctttg 915
Query: 317 ttgacacccaccacaagttttcaccctttgacgcccactccatcagcccttcccagccgt 376
|| | | | ||||||| ||||||||||| || || || | ||||||| |||||
Sbjct: 916 ctgcctcagtcttcaagtttccaccctttgacaccaacacctcccacccttccatgccgt 975
Query: 377 atcaaggataagctttgcccaacctcattgccaagtccaaatggtcaaccggcaagggtt 436
| ||||| | | ||||| | |||||||||| |||| || | || || ||||||||
Sbjct: 976 gtgaaggaagaattatgccccagctcattgccaggtcctaaaagccagcctgcaagggtg 1035
Query: 437 gaagtgagagtgagagaaggaagagctgtaaacatacacatgttttgcagtcgaagagca 496
||||| ||||| || |||||||| || || || || || ||||||| | | ||| ||
Sbjct: 1036 gaagttagagtaagggaaggaagggcagtcaatatccatatgttttctgctggcagacca 1095
Query: 497 ggtctcctgctctccactatgagggctttggataaccttggcctagacatccagcaagct 556
||| | || ||||| |||||||||||| |||| ||||||||| | || || ||||| ||
Sbjct: 1096 ggtttactcctctctactatgagggctctggacaaccttggcttggatattcagcaggcc 1155
Query: 557 gtcatcagttgtttcaatggttttgccatggatatctttcgagctgagcaatgtaaagaa 616
|||||||||||||||||||| ||||| ||||| | ||||||||||| ||||| | ||
Sbjct: 1156 gtcatcagttgtttcaatgggtttgcactggatgtttttcgagctgaacaatgcagggag 1215
Query: 617 gggcaagatgttcatcctgagcaaataaaagcagtgcttctggattcagctggcttccat 676
|| || ||||| || |||||||| ||||| || || || |||||||||||||| |||
Sbjct: 1216 ggtcaggatgtcttaccagagcaaatcaaagccgtactgcttgattcagctggctttcat 1275
Query: 677 gg 678
||
Sbjct: 1276 gg 1277