Jatropha Genome Database

JcCB0240711.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0240711.10 + phase: 2 /partial
         (214 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

36771.m000012 longevity assurance factor, putative                    287   1e-77
30174.m009049 longevity assurance factor, putative                     52   1e-06

>36771.m000012 longevity assurance factor, putative
          Length = 798

 Score =  287 bits (145), Expect = 1e-77
 Identities = 196/213 (92%)
 Strand = Plus / Plus

                                                                       
Query: 2   tatgaagttgtccagacattggacaagcaaaggcatcgagtggaaggtccaatctattat 61
           ||||||||||||||||| ||||||||| | | |||||   |||| |||||||||||||||
Sbjct: 583 tatgaagttgtccagaccttggacaaggacaagcatccgctggatggtccaatctattat 642

                                                                       
Query: 62  tatgtgttcaatactcttctatattgcttgctcgttctccatatctactggtgggtcctg 121
           |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 643 tatgtgttcaattctcttctatattgcttgcttgttctccatatttactggtgggtcctg 702

                                                                       
Query: 122 atatatcggatgcttgttaagcaaatccaagcaaggggtcagataagtgaggatgttcga 181
           || |||||||||||||||||||||||||||||||| |||||| | |||||||||||||| 
Sbjct: 703 atttatcggatgcttgttaagcaaatccaagcaagaggtcagcttagtgaggatgttcgg 762

                                            
Query: 182 tctgattctgaaggagaagatgaacatgaagat 214
           |||||||||||||| ||||||||||||||||||
Sbjct: 763 tctgattctgaaggcgaagatgaacatgaagat 795


>30174.m009049 longevity assurance factor, putative
          Length = 927

 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 173 gatgttcgatctgattctgaaggagaagatgaacatga 210
           ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 883 gatgttcgatcagattctgaaggtgaagatgagcatga 920