Jatropha Genome Database

JcCB0238621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0238621.10 - phase: 0 /pseudo/partial
         (435 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29848.m004567 aspartate aminotransferase, putative                    192   1e-48

>29848.m004567 aspartate aminotransferase, putative
          Length = 1395

 Score =  192 bits (97), Expect = 1e-48
 Identities = 272/329 (82%), Gaps = 1/329 (0%)
 Strand = Plus / Plus

                                                                       
Query: 56  tgcatgagactctcaagggaaaggtgaggcatggaactggcagtttgactacatggttta 115
           ||||||| |||||||||| ||| ||||||| ||||| ||| ||| |   ||| |||||||
Sbjct: 50  tgcatgatactctcaaggaaaaagtgaggcttggaagtggtagtattggtacctggttta 109

                                                                       
Query: 116 acaaggagaaagcaaatcgctttaggaacactaagtctccaggaaggatatctatggcta 175
            |||||| ||||   ||  ||||| ||| ||||||||| | ||||| ||||||||| || 
Sbjct: 110 ccaaggacaaagttcattcctttatgaaaactaagtcttctggaagaatatctatgactg 169

                                                                       
Query: 176 ttgcagtcaatgtatctcgtttcgaaggtataacaatggctcc-cctgatccaattcttg 234
            ||| || ||  | |||||||| || ||||||||||||||||  |||||||| |||||||
Sbjct: 170 ctgcggttaacatttctcgttttgagggtataacaatggctcttcctgatcctattcttg 229

                                                                       
Query: 235 gtgtatcagaagcttttcgagcagacacaaatgatttgaaactcaaccttggagttgggg 294
           | || || ||||||||| |||| ||||   | |    ||| ||||||||||||||||| |
Sbjct: 230 gagtttctgaagcttttagagctgacaatgacgccaagaagctcaaccttggagttggcg 289

                                                                       
Query: 295 cctaccgaactgaagagctacatccttatgttctcaatgttgttaagaaggcagagaatc 354
           | ||||||||||||||||||||||| ||||| ||| |||||||||||||||| |||||||
Sbjct: 290 cttaccgaactgaagagctacatccctatgtgctcgatgttgttaagaaggctgagaatc 349

                                        
Query: 355 ttatgctggagaggggtgaatataaagag 383
           |||||||||||||||||||| ||||||||
Sbjct: 350 ttatgctggagaggggtgaaaataaagag 378