Jatropha Genome Database

JcCB0237541.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0237541.10 - phase: 0 
         (285 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29739.m003778 DNA binding protein, putative                            86   1e-16

>29739.m003778 DNA binding protein, putative
          Length = 861

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                       
Query: 16  cctcaaaatccacctagaaagcataagtttgtgcctaaagctccgccacgccgggcacca 75
           |||||| |||||||||| ||||  |||| | ||||||||||||| |||||| || |||||
Sbjct: 16  cctcaagatccacctaggaagctcaagtatatgcctaaagctcctccacgcaggccacca 75

                                                                       
Query: 76  aaggttgaaattaaaagcgaaaagattgaggaagttgatgctgttcaggcaatgaatttg 135
           |||  |||| ||||||| ||||||  |||||| |  ||||||  |||||||||||| || 
Sbjct: 76  aagcctgaagttaaaagtgaaaaggctgaggatgaggatgctactcaggcaatgaagtta 135

                      
Query: 136 atgaaacaatt 146
           |||||||||||
Sbjct: 136 atgaaacaatt 146