Jatropha Genome Database
- JcCB0236181.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0236181.10 - phase: 2 /partial
(748 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29895.m000321 Ethylene-responsive transcription factor 1B, putative 327 6e-89
29900.m001561 Ethylene-responsive transcription factor, putative 64 1e-09
29603.m000509 Ethylene-responsive transcription factor, putative 62 5e-09
29680.m001678 Ethylene-responsive transcription factor 1B, putative 60 2e-08
29584.m000234 Ethylene-responsive transcription factor 1B, putative 58 8e-08
>29895.m000321 Ethylene-responsive transcription factor 1B, putative
Length = 675
Score = 327 bits (165), Expect = 6e-89
Identities = 440/533 (82%), Gaps = 12/533 (2%)
Strand = Plus / Plus
Query: 111 actctcccaattctgatttctcatcggaatcttctttcggatcgccggaatccttctata 170
||||||| ||||| ||||| ||||||||||| || ||||| |||||||| ||||| |||
Sbjct: 20 actctccaaattccgatttttcatcggaatcctccttcgggtcgccggagtccttttatg 79
Query: 171 gcccatcgtttaaccaagattctctccctttcaatgaaaatgattccgaagaaatgcttt 230
|| || | |||| |||| | |||||||||||||||||||| || |||||||||
Sbjct: 80 gc------ttcagccaaaattccttacctttcaatgaaaatgattcagaggaaatgcttc 133
Query: 231 tgtatggactaatttcagaggcaacgcaagaaacgtcaaaaatggattattcgaacnnnn 290
| ||||| ||||| |||||||| || |||||||| |||||||| |||||||| ||
Sbjct: 134 tttatggtctaatatcagaggctacccaagaaacatcaaaaatagattattcaaatagaa 193
Query: 291 nnntcaaagaagaggaggtgagttcaataataaaacaaaacacaaagaaggaaagcaaat 350
|||||||||| ||||| ||||||||| | ||| ||| | ||||| |||| |||
Sbjct: 194 acctcaaagaagaagaggttagttcaatagtgaaagaaagtcccaagaaagaaa---aat 250
Query: 351 ccttcagaggtgtaaggaggcggccatggggaaaattcgcggcggagataagagattcaa 410
| | |||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct: 251 catatagaggtgttaggaggcggccgtggggtaaattcgcggcggagataagggattcaa 310
Query: 411 ctaggcatggaataagagtatggttagggacatttgatagcgcagaggcagctgctttag 470
| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| | |
Sbjct: 311 caaggcatggaataagggtatggttagggacatttgatagtgcagaggcagctgctctgg 370
Query: 471 cttacgatcaagctgctttttcaatgagaggagctggggctgtactgaattttccagttg 530
|||| ||||||||||||||||| ||| ||||| | ||| |||| |||||||||| ||
Sbjct: 371 cttatgatcaagctgctttttcgatgcgaggacccaatgctatacttaattttccagctg 430
Query: 531 aaagagtaaaagagtcacttgaggatatgaaatacagccatgaagaagatggctgctcac 590
||||||| || || ||||| ||||| ||||| ||||| ||| |||||||| |||||||
Sbjct: 431 aaagagttaaggaatcactcgaggaaatgaagtacag---tgatgaagatggttgctcac 487
Query: 591 ctgttgtagctcttaaaagaaaacatactatgagaaggaaaattatgagcaga 643
|||| || |||||||||||||| ||| ||||||| |||||||| |||||||||
Sbjct: 488 ctgtagttgctcttaaaagaaagcattctatgaggaggaaaatgatgagcaga 540
Score = 52.0 bits (26), Expect = 5e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 665 gttttggaagatttaggtcctgattacttggagcagcttctt 706
|||||||||||||||||| ||||||| ||||| || ||||||
Sbjct: 586 gttttggaagatttaggtgctgattatttggaacaacttctt 627
>29900.m001561 Ethylene-responsive transcription factor, putative
Length = 741
Score = 63.9 bits (32), Expect = 1e-09
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 362 gtaaggaggcggccatggggaaaattcgcggcggagataagagattcaactaggcatgga 421
|||||||| |||| ||||| |||| |||||| ||||||||||| || | || | |||
Sbjct: 394 gtaaggagaaggccttggggtaaatacgcggcagagataagagactcgtcgagaaaagga 453
Query: 422 ataagagtatggttagggacatttgatagcgcagaggcagctgctttagcttacgatcaa 481
|||||| ||| | ||||| ||||||| ||||| ||||| ||||||||||||||| ||
Sbjct: 454 gcaagagtttggcttgggacttttgatacagcagaagcagcagctttagcttacgataaa 513
Query: 482 gctgcttt 489
||||||||
Sbjct: 514 gctgcttt 521
>29603.m000509 Ethylene-responsive transcription factor, putative
Length = 456
Score = 61.9 bits (31), Expect = 5e-09
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 368 aggcggccatggggaaaattcgcggcggagataagagattcaactaggcatggaataaga 427
||||||||||||||||||||||| ||||||||| |||| | | |||||||||| |||
Sbjct: 58 aggcggccatggggaaaattcgcagcggagatacgagacccttcgaggcatggaacaagg 117
Query: 428 gtatggttagggacatttgatagcgcagagg 458
| ||| |||| |||||||||| ||| ||||
Sbjct: 118 ttgtggctaggaacatttgataccgcggagg 148
>29680.m001678 Ethylene-responsive transcription factor 1B, putative
Length = 675
Score = 60.0 bits (30), Expect = 2e-08
Identities = 117/146 (80%)
Strand = Plus / Plus
Query: 356 agaggtgtaaggaggcggccatggggaaaattcgcggcggagataagagattcaactagg 415
|||||||| || | ||| || ||||| |||| ||| ||||||||||||||||| || ||
Sbjct: 277 agaggtgttagaaagcgaccgtggggcaaatacgcagcggagataagagattcgacgaga 336
Query: 416 catggaataagagtatggttagggacatttgatagcgcagaggcagctgctttagcttac 475
|||| ||||||| ||| |||| |||||||||| || || || || ||||| || ||
Sbjct: 337 aatggggtaagagtgtggctaggaacatttgatacagctgaagctgcagctttggcctat 396
Query: 476 gatcaagctgctttttcaatgagagg 501
|||||||| || ||| ||||||||||
Sbjct: 397 gatcaagccgcatttgcaatgagagg 422
>29584.m000234 Ethylene-responsive transcription factor 1B, putative
Length = 676
Score = 58.0 bits (29), Expect = 8e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 417 atggaataagagtatggttagggacatttgatagcgcagaggcagctgctttagcttacg 476
|||||||||| || ||| | || ||||| || |||||||| ||||| ||||||||||| |
Sbjct: 353 atggaataagggtttggcttggaacattcgacagcgcagaagcagcggctttagcttatg 412
Query: 477 atcaagctgctttttcaatgagagg 501
| |||||||| ||||| ||| ||||
Sbjct: 413 accaagctgcattttcgatgcgagg 437