Jatropha Genome Database

JcCB0234191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0234191.10 + phase: 0 /partial
         (378 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29648.m001931 Serine/threonine-protein kinase PBS1, putative          357   3e-98

>29648.m001931 Serine/threonine-protein kinase PBS1, putative
          Length = 1659

 Score =  357 bits (180), Expect = 3e-98
 Identities = 321/368 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    gatatcttgctccagaatacgcagaaaatggcattgtttctgtgagaacagatgtctatg 61
            |||||||||||||||| || ||||| |||||  ||||||| |||||||||||||||||||
Sbjct: 1280 gatatcttgctccagagtatgcagagaatgggtttgtttccgtgagaacagatgtctatg 1339

                                                                        
Query: 62   catttggcattattctcttacaattaatatcaggacaaaaagtagttgattcaaaaagaa 121
            ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||| 
Sbjct: 1340 catttggcattattctcttacaactaatatcaggacagaaagtagtagattcaaaaagag 1399

                                                                        
Query: 122  aggaaggacaacaatcacttcgacagtgggcagaaccactgattgagaagcttgcactac 181
            ||||||| | ||||||||||||||| |||||||||||| ||||||||| |||||| || |
Sbjct: 1400 aggaagggcgacaatcacttcgacaatgggcagaaccagtgattgagaggcttgcgctgc 1459

                                                                        
Query: 182  atgaactaatcgataaacgtgttggagattcatatgacacatatgaattatatcttatgg 241
            ||||||| |||||| ||||| | | ||||||||||||||||||||||||||| || ||||
Sbjct: 1460 atgaacttatcgatcaacgtatagcagattcatatgacacatatgaattatacctcatgg 1519

                                                                        
Query: 242  ctaaagcagcacaattgtgtatacaaagaagccctgaaatgcgaccatcaatgggagaga 301
            ||||||| ||| |  | ||| |||| ||||||||||||||||||||||| ||||||||| 
Sbjct: 1520 ctaaagctgcatacctatgtgtacagagaagccctgaaatgcgaccatcgatgggagagg 1579

                                                                        
Query: 302  tcattcgccttcttgagggagaaaatagccatctccaccgtttgcaagagcaagttttac 361
            |  | || ||||| |||||||| |||| |||| |||||| |||||  ||||| || ||||
Sbjct: 1580 ttctccgtcttctcgagggagagaataaccatgtccaccatttgcgggagcatgtattac 1639

                    
Query: 362  ctcattat 369
            | ||||||
Sbjct: 1640 cacattat 1647