Jatropha Genome Database

JcCB0231061.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0231061.20 - phase: 0 /partial/short
         (129 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29269.m000247 conserved hypothetical protein                          129   4e-30

>29269.m000247 conserved hypothetical protein
          Length = 1713

 Score =  129 bits (65), Expect = 4e-30
 Identities = 104/117 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    gaagctgctcttgcgaaaaccagagagctgaagaagctttgtgagagtaccctttcatcc 60
            ||||| |||||||| |||||||| ||||||||||||||||||||  | || ||||| || 
Sbjct: 1582 gaagcagctcttgcaaaaaccagggagctgaagaagctttgtgaaggcactctttcgtca 1641

                                                                     
Query: 61   atgtttgatggaagacctgttaacataattggtgagatcaataccttattgaacagc 117
            ||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 1642 atgtttgatggcagacctgttaatataataggcgagatcaataccttattgaacagc 1698