Jatropha Genome Database
- JcCB0230371.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0230371.10 - phase: 0 /partial
(1919 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013795 glutamate receptor 3 plant, putative 1758 0.0
30100.m000785 glutamate receptor 3 plant, putative 103 4e-21
29830.m001466 glutamate receptor 3 plant, putative 76 9e-13
29600.m000545 glutamate receptor 3 plant, putative 62 1e-08
>30170.m013795 glutamate receptor 3 plant, putative
Length = 2784
Score = 1758 bits (887), Expect = 0.0
Identities = 1647/1899 (86%), Gaps = 1/1899 (0%)
Strand = Plus / Plus
Query: 1 attgatggaa-ctcgagttgttgttcttcatgtaaattcgaagttgggttttgaagtctt 59
|||||||||| |||||||| || |||||||| ||||||| |||||||||||| ||| ||
Sbjct: 660 attgatggaatctcgagttattattcttcatctaaattctaagttgggttttacagtatt 719
Query: 60 ttctgtggcaaaataccttggtatgatgggtaatgggtatgtatggatagccacagattg 119
|||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 720 ttctgtagcaaagtaccttgggatgatgggcaatgggtatgtatggatagccacagattg 779
Query: 120 gctctcatccgttttagattcttcttctcctctatcttctgaggccatgggcacgatgca 179
||||||||| |||||||| ||| ||| |||||| |||||||| | |||| ||| |||||
Sbjct: 780 gctctcatcttttttagatactttttcacctctaccttctgagacgatggacacaatgca 839
Query: 180 aggagttcttactttgcgtcaacacataccggattcagatagaaagagatccttttcgtc 239
|||||||||| |||||||||| |||| |||| | || |||||||| || |||||||| ||
Sbjct: 840 aggagttcttgctttgcgtcagcacacaccgcagtcggatagaaaaaggtccttttcctc 899
Query: 240 caggtggagcaagttgactagtggttctccagggctgaattcttatgggctctgtgctta 299
||||||||||| ||| |||||||| |||||||||||||||||||| | ||||||
Sbjct: 900 tgcctggagcaagttaactggtggttcttttgggctgaattcttatgggctttatgctta 959
Query: 300 tgattctgtctggctggttgctcatgctattgatgcattttttgatcagggtgggattat 359
|||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 960 tgattctgtctggctgattgctcatgctattgatgcatttcttgaccagggtggcattat 1019
Query: 360 ctcattttctaatgattccaggttgcgctctgcaggaggtagtgatcttcaccttgatgc 419
|||||||||||||||||||||||||| |||| || ||| ||| ||||||| ||||||||
Sbjct: 1020 ctcattttctaatgattccaggttgcattctgtagaaggcagtaatcttcatcttgatgc 1079
Query: 420 aatgagtatttttgatgatggaagactcctgttggagaacatattgaaaagtgatcttgt 479
|||||| | ||| ||||||||| || || || ||||||||||| | |||||| ||||
Sbjct: 1080 aatgagcctctttaatgatggaacacatttgctgaagaacatattgcagagtgattttgt 1139
Query: 480 tggtttaacgggccctataaagtatgattcagacagatctcggattcttcctgcatatga 539
||||||||| || | | |||||| ||||||| | | |||| |||||||||||| |||||
Sbjct: 1140 tggtttaacaggtcgtgtaaagtttgattcacaaaagtctctgattcttcctgcttatga 1199
Query: 540 tgttattaatgtggttgggactggttttagaatggttggtttctggtccaattattctgg 599
| ||||||||||| |||| ||||| ||||| | ||||||||||||| |||||||||||
Sbjct: 1200 tattattaatgtgattggaactgggtttaggcagattggtttctggtcaaattattctgg 1259
Query: 600 tttatcaactgtgccacctgagacactctatataaggccaccaaatcggtcaagtgcaaa 659
|||||||| ||||| || ||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 1260 tttatcaattgtgcttcccgagacactctatacgaggccacctaatcgttcaagtgcaaa 1319
Query: 660 ccagcaattgtacagtgttatttggcctggagagacatcatcaaaaccccgtggatgggt 719
|||||||||| | ||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1320 ccagcaattgcagagtgttatttggcctggagagacattattaaaaccccgtggatgggt 1379
Query: 720 tttccctaacaatgggaagcaattgagaattggtgtgcccattcgggtcagtttcaagga 779
||| |||||||| |||||||| |||| |||||||||||| |||||||| |||| ||||||
Sbjct: 1380 ttttcctaacaacgggaagcagttgaaaattggtgtgcctattcgggttagttacaagga 1439
Query: 780 atttgtaacacgagtacaaggaactgacatgttcaaaggtttttgcatagatgtatttac 839
|||||| ||| ||| | ||| |||||||| |||||||||||||| ||||||||||||||
Sbjct: 1440 gtttgtatcacaagtgcgagggactgacatattcaaaggtttttgtatagatgtatttac 1499
Query: 840 agctgctgcaagtttgttaccatatgctgttccctatcagtttgtcccctttggaaatgg 899
||||||| |||||| ||||||||||||||||| ||||||||| | |||| |||| ||||
Sbjct: 1500 agctgctataagtttattaccatatgctgttccatatcagtttattccctatggagatgg 1559
Query: 900 taaagcaaacccaagctacacagagcttgtgaacatgatcactacgggtgtccttgatgc 959
||| |||||||||||| ||||||||||| | ||||||| | ||| |||||||
Sbjct: 1560 caaaagaaacccaagctatacagagcttgtacaattgatcacagctggttcaattgatgc 1619
Query: 960 tgttgttggtgatattgctatagtcacaaatcgaacaaaaatcgtggattttacgcagcc 1019
||||||||||||||||||||| ||||||||| |||||||||| || |||||||| || ||
Sbjct: 1620 tgttgttggtgatattgctatcgtcacaaatagaacaaaaattgttgattttacacaacc 1679
Query: 1020 atatgctgcatctggactggttattgtggccccatttaggaagttgaaatcaggggcctg 1079
||||| |||||||| |||| ||||||| ||||||||||||||||| ||||||| ||
Sbjct: 1680 atatgtatcatctggattggtggttgtggctccatttaggaagttgaatacaggggcttg 1739
Query: 1080 ggctttcttgcagccatttagtccacttatgtgggttgtcactgcctgtttcttcattgc 1139
|||||||||||| |||||| ||| |||||||||| ||| ||| ||||||||| |||||
Sbjct: 1740 ggctttcttgcaaccattttctcctcttatgtgggctgttactttctgtttctttattgc 1799
Query: 1140 tgttggcacagttgtgtgggttctggagcataggataaatgatgaattcaggggcccacc 1199
|||||| |||||||||| || |||||||||| | |||||||||||||||||||||||
Sbjct: 1800 tgttggtgtagttgtgtggattttggagcatagaaccaatgatgaattcaggggcccacc 1859
Query: 1200 taaacaccaaattattaccgttttatggttcagcctctcaacaatgttttttgcccatag 1259
|| | | || ||||| ||| |||||||||||||||||||||| | |||||||||||||
Sbjct: 1860 tagaaaacagattataaccattttatggttcagcctctcaactctattttttgcccataa 1919
Query: 1260 agaaaacaccgtgagcaccctgggtcgttttgtgctaattatatggctctttgtggtttt 1319
||||||||| ||||||||| ||||||| ||||||||||| |||||||| |||||||| ||
Sbjct: 1920 agaaaacactgtgagcaccttgggtcgatttgtgctaataatatggctatttgtggtctt 1979
Query: 1320 aataattaactcgagctacactgcaagtcttacatcaatactcacagtgcaacagttatc 1379
||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 1980 aattataaactcaagctacactgcaagtctgacatcaatactcacagtgcaacagctata 2039
Query: 1380 ttctcctatcaaagggattgaaagtttgaaggagagtgatgatcccataggatatcaagt 1439
||||||||| || || |||||||| |||||||| |||||||| ||||||||||| |||||
Sbjct: 2040 ttctcctattaatggaattgaaagcttgaaggaaagtgatgagcccataggataccaagt 2099
Query: 1440 gggttcttttgctgagtattatttgagtgaggaacttggaataaataaatctaggctggt 1499
|||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| ||
Sbjct: 2100 aggttctttcgctgagtattacttgagtgaggaacttggaatatctaaatctaggctagt 2159
Query: 1500 tccccttggatcacctgaagcatatgcaacagcgctccaacgtggtcctaataaggaggg 1559
| ||||| ||||| ||||| ||||| |||||||| |||||||| ||||| |||| ||
Sbjct: 2160 agcacttggctcaccagaagcgtatgctacagcgctacaacgtggccctaaaaaggccgg 2219
Query: 1560 cggtgttgctgctgtggttgatgaacgtccttatgttgaactcttcctctcaactcagtg 1619
|||||||||||| | |||||||||| ||||||||||||||||||||||||| | |||||
Sbjct: 2220 gggtgttgctgctatcgttgatgaacttccttatgttgaactcttcctctcatcccagtg 2279
Query: 1620 cacattcaggattgtaggtcaagaattcacaaaaagtggctggggttttgcatttccacg 1679
| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 2280 ctcattcaggattgtaggtcaagaatttacaaaaagtggttggggttttgcatttccacg 2339
Query: 1680 ggactctcctttggctgttgatatgtcaactgcaattctcgaactaacggagaatggtga 1739
||||||||| || |||||||||||||| ||||||||||| |||||| | || ||||||||
Sbjct: 2340 ggactctcccttagctgttgatatgtcgactgcaattctagaactatcagaaaatggtga 2399
Query: 1740 tcttcaaaggatccatgacaaatggctcatgcacagcggttgcagttcagatgcatctga 1799
||| ||||||||||||||||| ||||||||||| |||||||||||||||||| || ||||
Sbjct: 2400 tctccaaaggatccatgacaagtggctcatgcatagcggttgcagttcagatacaactga 2459
Query: 1800 acttgaatcagatagacttgagctaaaaagcttttggggtctgtttcttatttgcgggat 1859
| | ||||| ||||| |||||||| |||||||||||||| || ||||| ||||| || ||
Sbjct: 2460 aatcgaatcggataggcttgagctcaaaagcttttggggcctctttctcatttgtggaat 2519
Query: 1860 agcttgcttcttgtctctcttcgtatacttttggcagat 1898
|||||||||| | |||||||| ||||||||| ||||||
Sbjct: 2520 agcttgcttcattgctctcttcatatactttttgcagat 2558
>30100.m000785 glutamate receptor 3 plant, putative
Length = 2775
Score = 103 bits (52), Expect = 4e-21
Identities = 145/176 (82%)
Strand = Plus / Plus
Query: 1225 tggttcagcctctcaacaatgttttttgcccatagagaaaacaccgtgagcaccctgggt 1284
||||| ||| ||||||| |||||||| || ||||||||||| || |||||||| || |||
Sbjct: 1867 tggtttagcttctcaaccatgtttttcgctcatagagaaaatacagtgagcacactaggt 1926
Query: 1285 cgttttgtgctaattatatggctctttgtggttttaataattaactcgagctacactgca 1344
||| | || || || || ||||| ||||| || || ||||| |||||||||||||| |||
Sbjct: 1927 cgtatggttctgatcatctggctttttgttgtgttgataatcaactcgagctacacagca 1986
Query: 1345 agtcttacatcaatactcacagtgcaacagttatcttctcctatcaaagggattga 1400
||||| |||||||| || || || ||||||||||| || || || ||||| |||||
Sbjct: 1987 agtctcacatcaatcctgactgtccaacagttatcctcgcccattaaaggaattga 2042
Score = 71.9 bits (36), Expect = 1e-11
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 1563 tgttgctgctgtggttgatgaacgtccttatgttgaactcttcctctc 1610
|||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 2190 tgttgctgctgtggttgatgaacgaccttatgtggacctcttcctctc 2237
>29830.m001466 glutamate receptor 3 plant, putative
Length = 2310
Score = 75.8 bits (38), Expect = 9e-13
Identities = 143/178 (80%)
Strand = Plus / Plus
Query: 1223 tatggttcagcctctcaacaatgttttttgcccatagagaaaacaccgtgagcaccctgg 1282
||||||| ||| | ||||| ||||| || ||||| |||||||| ||||| ||||| || |
Sbjct: 1853 tatggtttagcttttcaacgatgttcttcgcccacagagaaaataccgtcagcacacttg 1912
Query: 1283 gtcgttttgtgctaattatatggctctttgtggttttaataattaactcgagctacactg 1342
|||| |||| | | |||||||| |||||||| | ||||| |||||||||||||| |
Sbjct: 1913 gtcgcattgttttgctcatatggctgtttgtggtgcttataatcaactcgagctacaccg 1972
Query: 1343 caagtcttacatcaatactcacagtgcaacagttatcttctcctatcaaagggattga 1400
| || ||||| ||||| || ||||| || ||| | |||||||| || |||||||||||
Sbjct: 1973 cgagccttacctcaatccttacagtacagcagctttcttctcccattaaagggattga 2030
>29600.m000545 glutamate receptor 3 plant, putative
Length = 2817
Score = 61.9 bits (31), Expect = 1e-08
Identities = 115/143 (80%)
Strand = Plus / Plus
Query: 1235 tctcaacaatgttttttgcccatagagaaaacaccgtgagcaccctgggtcgttttgtgc 1294
||||||||||||| || |||| ||||| ||||| |||||| || |||| ||||||||||
Sbjct: 1919 tctcaacaatgttcttctcccacagagagaacactgtgagcgccttgggacgttttgtgc 1978
Query: 1295 taattatatggctctttgtggttttaataattaactcgagctacactgcaagtcttacat 1354
| | |||||||| ||||| || || || || || || ||||| || || ||||| ||||
Sbjct: 1979 ttctcatatggctatttgtagtgttgatcatcaattcaagctatacagccagtctgacat 2038
Query: 1355 caatactcacagtgcaacagtta 1377
| || || |||||||| ||||||
Sbjct: 2039 ctatcctgacagtgcagcagtta 2061