Jatropha Genome Database
- JcCB0229931.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0229931.10 + phase: 2 /partial
(682 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29883.m001986 DNA binding protein, putative 674 0.0
>29883.m001986 DNA binding protein, putative
Length = 1326
Score = 674 bits (340), Expect = 0.0
Identities = 526/588 (89%)
Strand = Plus / Plus
Query: 80 aatggtcatggcatcccaaaggcacaggttgaggctgatggtggatcgcttcgcctccca 139
||||||||||| ||| |||| | ||| |||||||||||||||||| |||||||| |||
Sbjct: 457 aatggtcatggtatcacaaaagggcagaatgaggctgatggtggatcacttcgccttcca 516
Query: 140 gcattaacctctgttcagagaaaacaagaggtaccaatgaggcaaacgaccagtgggtct 199
|||||| | ||| | | |||||||||||||||||| |||||||| | |||||||| |||
Sbjct: 517 gcattaccttctatgcccagaaaacaagaggtaccagtgaggcaagcaaccagtggatct 576
Query: 200 tcaagagaagattcagatgacgatgaacttgatggggatacagaaaccaatgaacatttg 259
|||||||||||||| ||||| ||||||||||| || ||||||||||||||||| || ||
Sbjct: 577 tcaagagaagattctgatgatgatgaacttgaaggagatacagaaaccaatgacaatatg 636
Query: 260 gatcctgctgatgaaaaacgtgcaaggaggatgcagtcaaatcgagagtctgctagacgt 319
||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 637 gatcctgctgatgaaaaacgtgcgaggaggatgcagtcaaatcgagagtcagccagacgt 696
Query: 320 tcaagaagaagaaaacaagcgcagctgaatgaacttgaagcacaggtcggtcaattgagg 379
||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||||
Sbjct: 697 tcaagaagaagaaaacaggcacagctgaatgaacttgaagcacaggttggtcaactgaga 756
Query: 380 gatgaacgcacaacattgctaacgcgcttaacagacataaataaaaagtgcgacgatgct 439
||||| |||||| ||||||| |||||||||||||||||||| ||||||||||| || |||
Sbjct: 757 gatgagcgcacatcattgcttacgcgcttaacagacataaacaaaaagtgcgatgaggct 816
Query: 440 tctgttgacaacagaattttgaatgctaatattgaaacattaaggacaaaggtcaaaatg 499
|||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 817 tctgttgataacagaattttgaatgctaatattgaaacattgaggacaaaggtaaaaatg 876
Query: 500 gctgaagatcaagttaaacgagtgacaggtttgaaccccatgcttctagcaaggtccaac 559
|| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||
Sbjct: 877 gccgaagatcaagttaaacgagtgacgggtttgaacccaatggttctagcaaggtccaac 936
Query: 560 attcctagccttggaatgcagtttgttgctggccaaacagatacgtctacaaatgttgct 619
|| |||| | || ||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 937 atgcctaatatggggatgcagtttgttgctggccaaacagatgtatctgcaaatgttgct 996
Query: 620 ggaccaatgcaaacaaacaataaccatttctttcaccattcagttcct 667
| ||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 997 gttccaatgcaaccaaacaacaaccatttctttcaccattctgttcct 1044