Jatropha Genome Database
- JcCB0226331.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0226331.10 - phase: 0 /partial
(681 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29168.m000387 cyclin d, putative 430 e-120
>29168.m000387 cyclin d, putative
Length = 1161
Score = 430 bits (217), Expect = e-120
Identities = 376/429 (87%)
Strand = Plus / Plus
Query: 7 aaagggtggccaatgcaactgctatctgttgcttgcttgtcattagcagctaaaatggag 66
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aaaggatggccaatgcaactcttatctgttgcttgcttgtcattagcagctaaaatggag 519
Query: 67 gaagctctcgttccttctcttttggatctccaggttgaaggtgcgaaatatatctttgaa 126
||| |||| ||||||||||| |||||||| ||||| |||||||| |||||||| ||||||
Sbjct: 520 gaacctcttgttccttctctattggatcttcaggtagaaggtgccaaatatatttttgaa 579
Query: 127 ccaagaacaatccgtagaatggaacttctcgttcttagtgtgttggattggaggctacga 186
|| ||||||||||| || ||||||||||| ||||||||||||||||||||| |||| |||
Sbjct: 580 cccagaacaatccggaggatggaacttcttgttcttagtgtgttggattggcggctgcga 639
Query: 187 tctgtaacaccatttagctttcttgatttctttgcatgcaagctcgattcatcatcaact 246
|| || || |||||||||||| ||| ||| || ||||| |||||||| || || ||
Sbjct: 640 tccgtgacgccatttagctttattggttttttcgcatgtaagctcgactcgtctggtgct 699
Query: 247 tacatcgggtttctgatttcacgggccaaagagatcattttatctaatatgcaagaagcg 306
|| | |||||||| |||||||| || | ||| ||||||||||| |||||||||||||||
Sbjct: 700 tatactgggtttctaatttcacgagctacagaaatcattttatcaaatatgcaagaagcg 759
Query: 307 agctttcttgagtattggccatcgagcattgctgctgcagctatactttgtgcagccaat 366
|||||||| ||||| ||||| || ||||||||||| || || |||||||||||||||||
Sbjct: 760 agctttctcgagtactggccgtcaagcattgctgccgccgcaatactttgtgcagccaac 819
Query: 367 gaaataccaaaattgtctcttgttaatcctgagcttgctgaatcatggtgtgatggtcta 426
||||||||||| ||||||||||||||||| || | ||||||||||||||||||||| |||
Sbjct: 820 gaaataccaaacttgtctcttgttaatcccgaacatgctgaatcatggtgtgatgggcta 879
Query: 427 agcaaagaa 435
|||||||||
Sbjct: 880 agcaaagaa 888
Score = 117 bits (59), Expect = 9e-26
Identities = 177/218 (81%), Gaps = 15/218 (6%)
Strand = Plus / Plus
Query: 458 taatgcaagatctcgtgcttgataatagccggagaaaaccccctaaagtcttaccactgc 517
||||||||||||| |||||||| |||||||||| || | || ||||| |||||| |||
Sbjct: 941 taatgcaagatcttgtgcttgacaatagccggaaaacgcttccaaaagttttaccagtgc 1000
Query: 518 ttagagtaacaatccgggcccgaatgaggtccagtgactcgtct---------tcttcac 568
||||||||||||| |||||| ||||||||||||||||||||||| ||||| |
Sbjct: 1001 ttagagtaacaattcgggccagaatgaggtccagtgactcgtcttccttgtcatcttcgc 1060
Query: 569 caacttcatcttcatcctcgtcaccatc------atcttataaaagaagaaaattaaata 622
|| | ||| ||||| || ||| |||| |||||||||||| ||||| |||||||
Sbjct: 1061 catcactatcgtcatcatcttcatcatcgtcaatatcttataaaaggagaaagttaaata 1120
Query: 623 actgcttatgggtggatgatgacaaaggaaattccgag 660
| ||||||||||||||| ||||||||||||| ||||||
Sbjct: 1121 attgcttatgggtggataatgacaaaggaaactccgag 1158