Jatropha Genome Database

JcCB0224701.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0224701.10 + phase: 2 /partial
         (672 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011273 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synth...   293   7e-79

>30190.m011273 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
           synthase, putative
          Length = 693

 Score =  293 bits (148), Expect = 7e-79
 Identities = 208/228 (91%)
 Strand = Plus / Plus

                                                                       
Query: 419 gatgtgttattgcactgtgttgtggatgcaatattgggtgcactggggctgcctgatatt 478
           ||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 211 gatgtgttattgcactgtgttgtggatgcaatattaggtgcacttgggctgccagatatt 270

                                                                       
Query: 479 gggcagatattcccagattctgatcccaagtggaaaggagcaccatcatctgtttttatc 538
           |||||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||| 
Sbjct: 271 gggcagatattccccgattctgatcctaagtggaagggagcaccgtcatctgtttttatt 330

                                                                       
Query: 539 caagaagctgtgagacttatgcatgaggcaggctatgacattggaaacttagatgccacc 598
            |||||||||| ||||| |||||||| |||||||| || ||||||||||| |||||||||
Sbjct: 331 aaagaagctgtaagactcatgcatgaagcaggctacgatattggaaacttggatgccacc 390

                                                           
Query: 599 ttgattcttcaaagaccaaaactgagcccacacaaggaagctatcaga 646
            |||| || |||||||||||||| |||||||||||||| |||||||||
Sbjct: 391 ctgatcctccaaagaccaaaacttagcccacacaaggaggctatcaga 438



 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 74  atggccactcacttgtacacctcttattctccaatcactacca 116
           |||||||||||| ||| |||||||||||| |||||||||||||
Sbjct: 1   atggccactcacctgtgcacctcttattcaccaatcactacca 43