Jatropha Genome Database

JcCB0224001.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0224001.20 + phase: 0 /partial
         (356 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001424 Adipocyte plasma membrane-associated protein, puta...   115   2e-25
29830.m001423 Adipocyte plasma membrane-associated protein, puta...    84   6e-16

>29830.m001424 Adipocyte plasma membrane-associated protein,
           putative
          Length = 1143

 Score =  115 bits (58), Expect = 2e-25
 Identities = 106/122 (86%)
 Strand = Plus / Plus

                                                                       
Query: 137 tcatttatacaacgtgtgcagatgggtggataaaacgagtcacagtgaatgactcggtgt 196
           ||||||||||||  |||||||  ||||||||||| ||||| ||||| || ||||||||| 
Sbjct: 287 tcatttatacaagttgtgcaggcgggtggataaagcgagttacagtcaacgactcggtga 346

                                                                       
Query: 197 ctgactcggttgtggagaactgggttaacactggtggtagaccacttggactcgtcctgg 256
           |||||||||| || ||||| ||||||||||| ||||||||||| || ||||||| |||||
Sbjct: 347 ctgactcggtcgtcgagaattgggttaacacaggtggtagacccctcggactcgccctgg 406

             
Query: 257 ga 258
           ||
Sbjct: 407 ga 408


>29830.m001423 Adipocyte plasma membrane-associated protein,
           putative
          Length = 939

 Score = 83.8 bits (42), Expect = 6e-16
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                       
Query: 151 tgtgcagatgggtggataaaacgagtcacagtgaatgactcggtgtctgactcggttgtg 210
           |||| |||||||||||| || || || ||  | |||||||||||| |||||||||| || 
Sbjct: 286 tgtgtagatgggtggattaagcgggttactataaatgactcggtggctgactcggtcgtt 345

                                                 
Query: 211 gagaactgggttaacactggtggtagaccacttggact 248
           ||||| |||||| |||||||||||||||| ||||||||
Sbjct: 346 gagaattgggttcacactggtggtagaccccttggact 383