Jatropha Genome Database
- JcCB0218961.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0218961.10 + phase: 2 /partial
(2098 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m013852 conserved hypothetical protein 579 e-164
30147.m013851 conserved hypothetical protein 145 1e-33
>30147.m013852 conserved hypothetical protein
Length = 1323
Score = 579 bits (292), Expect = e-164
Identities = 472/532 (88%)
Strand = Plus / Plus
Query: 824 atggaccctgaagttcaaggtgtcttaactgctgcacagaagctatggcctcacatacat 883
||||| ||||||||||||||||| || |||||||| ||||||| ||||| || || ||
Sbjct: 1 atggatcctgaagttcaaggtgttttgactgctgctcagaagcagtggccacatatccaa 60
Query: 884 atatctgattcattggtcatggcagatagtgcagtgaagatggcaaaagccggatgcaaa 943
|| |||||||||||||| ||||| |||| || ||||||||||| |||| |||||||||
Sbjct: 61 atttctgattcattggttatggctgataaggctgtgaagatggctcaagctggatgcaaa 120
Query: 944 ttcataacagtcttgggtgtagattttatgtcagaaaatgttcgtgccatccttgatcag 1003
| ||||||||||||||||| ||||||||||| |||||||||||||| || |||||||||
Sbjct: 121 tatataacagtcttgggtgttgattttatgtctgaaaatgttcgtgcaattcttgatcag 180
Query: 1004 gctggctttggagaggttggtgtttataggatgtcaagagagcgcattggttgttcattg 1063
||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |
Sbjct: 181 gctggctttggagaggttggtgtttatagaatgtcaaatgagcgaattggttgttctcta 240
Query: 1064 gcagatgctgcatctagccctgcttatatgaattatcttgaggcagcttcagggtcccct 1123
|||||||||||||| ||||||| |||||||| |||||||||||||||||||||||| ||
Sbjct: 241 gcagatgctgcatccagccctgattatatgagttatcttgaggcagcttcagggtctact 300
Query: 1124 cattcattgcatgttgtctacataaatacttcacttgagacaaaggcttatgctcatgag 1183
|||| ||||||||||||||||| ||||| ||||||||||| || |||| ||||||||
Sbjct: 301 aattccttgcatgttgtctacattaatacctcacttgagacgaaagctttcgctcatgaa 360
Query: 1184 cttgtgcctacaatcacctgtacttcttctaatgtcgtgcaaactatcctgcaggctttc 1243
||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 361 attgtgcctacagtcacctgtacttcttctaatgttgtgcagactatcctgcaggcttat 420
Query: 1244 gctcaaattcctgatttaaatgtgtggtatggacctgattcatacatgggtgccaatatt 1303
||||||||||| ||| ||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 421 gctcaaattccagatctaaatgtatggtatgggcctgattcttacatgggtgccaatatt 480
Query: 1304 gcaaaattgttccaacaaatgacagtgatgactgatgatgaaattgctgagg 1355
|||||| |||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 481 gcaaaactgtttcaacaaatgacaatgatgactgatgatgaaattgctgagg 532
Score = 571 bits (288), Expect = e-162
Identities = 599/703 (85%), Gaps = 6/703 (0%)
Strand = Plus / Plus
Query: 1353 aggatggaacatgtattgttcatcatctttttggaaatgaagttgtggagaagataaatg 1412
||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |
Sbjct: 593 aggatggaacatgtattgttcatcatcttttcggacatgaagttgtggagaagataaacg 652
Query: 1413 agatgtactgtgatgctttccttactgctcatcttgaggtccctggagaaatgttttcct 1472
||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |
Sbjct: 653 agatgtattgtgatgctttcctaactgctcatcttgaagtccctggagaaatgttttctt 712
Query: 1473 tggcaatggaagcaaagaggagaggaatgggggttgtcggttccactcaaaatatattag 1532
|||| ||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||
Sbjct: 713 tggccatggaagcaaagaggagaggaatgggggtagtcggttccacccagaatatcttag 772
Query: 1533 attttataaagcagagagttcaagaggcattggatagaaatgtcaatgatcacttgcaat 1592
|||| |||||||| ||||||||||||||| |||||||||||||| |||||||| | ||||
Sbjct: 773 atttcataaagcatagagttcaagaggcactggatagaaatgtcgatgatcacctccaat 832
Query: 1593 ttgttttgggaacagaatcagggatgattacttcaattgttgcagcagttcagcatttat 1652
|||| ||||| || |||||||| ||||| ||| ||||||| |||||||||||||| ||||
Sbjct: 833 ttgtgttggggacggaatcaggaatgatcactgcaattgtcgcagcagttcagcagttat 892
Query: 1653 taggttctgcagggtcttcagcaggagctaaaattaatgttgaaattgtctttccagtct 1712
| | || ||| |||||| | || ||||||||||||||||||||||||||| |||||||
Sbjct: 893 tcagatccgcaaagtcttctggagaagctaaaattaatgttgaaattgtcttcccagtct 952
Query: 1713 catcagactcgataacaagaacatcatcaaattcatccccaagcctgaaatcagtaacgg 1772
| ||||||| ||||||| |||| | | || ||| | | |||||| | |
Sbjct: 953 cgacagactcaataacaaaaacacc------gccgtctccaggtgtagaatcagggaaag 1006
Query: 1773 caggggactttgcattacctgttgtacctggagttgcttctggggaaggatgttcccttc 1832
||||||| || | ||||||||||||||||||||||| |||||| |||||||| |||
Sbjct: 1007 caggggagttcgagttacctgttgtacctggagttgcaagtggggagggatgttctattc 1066
Query: 1833 atggtggctgtgcttcctgtccatatatgaagatgaactctctcgattcccttctaaaag 1892
| || |||||||| || |||||||||||||||||||| ||||| || | ||||||||||
Sbjct: 1067 acgggggctgtgcgtcgtgtccatatatgaagatgaattctcttaatgctcttctaaaag 1126
Query: 1893 tttgtgagcacctgcctgatgagaaaaatgtcattgcggagtatgaagcagagcggttta 1952
|||| ||||||||||||||||| ||||| | ||||| | || |||| || || | ||
Sbjct: 1127 tttgccagcacctgcctgatgaggaaaatataattgctgcctacaaagctgatcgatata 1186
Query: 1953 aactgcaaactccgagtggaaaatcaattgctgatgttggttgtgaaccaatactgcaca 2012
||| |||||| || ||||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 1187 aacggcaaacaccaagtggaaaatcaattgcagaagttggatgtgaaccaatactacaca 1246
Query: 2013 tgagacacttccagatgacaaaagaaatgccagagaagcttgt 2055
||||||| ||||||| ||||||||| ||||||||||||||||
Sbjct: 1247 tgagacatttccagactacaaaagaactgccagagaagcttgt 1289
>30147.m013851 conserved hypothetical protein
Length = 819
Score = 145 bits (73), Expect = 1e-33
Identities = 283/353 (80%)
Strand = Plus / Plus
Query: 383 cgagtctggctcgacgcccagttggaccgctacggaaagatgagatttttggcggacagc 442
|||||||||||||||||||||||||| || || |||||||||||||| || |||||
Sbjct: 409 cgagtctggctcgacgcccagttggataattatgggaagatgagatttttagctgacagt 468
Query: 443 gattcggagattacgcgagggttctgtgcttgtttgttatcggtattggacggggcggcg 502
||||| || |||| |||| |||||||| |||||||| || || | || ||||||||
Sbjct: 469 gattctgacgttactagaggattctgtgcatgtttgttgtctgtgcttgatggggcggct 528
Query: 503 cctgaggaggtgttgagcgtgaagacggaaaatttggctgcgctcaatgttgggttgcct 562
|| |||||||| ||||| || | ||||| |||| || ||| | |||||||||||||||
Sbjct: 529 ccggaggaggttttgagtgttactacggaggatttagcggcgttgaatgttgggttgcct 588
Query: 563 ggcggcgagaggtcgagagtgaatacttggcataatgtgttggtaagtatgcagaagaga 622
|| || || ||||| ||||||||||| |||||||||||||| || |||||||| |||||
Sbjct: 589 ggtggtgaaaggtccagagtgaatacgtggcataatgtgttagttagtatgcaaaagagg 648
Query: 623 acgaggaaactggtggcggaaagggaagggaagcaacttgtcgatccatttccttcgttg 682
|| | ||| |||| || ||||| ||||| || || | | | ||||| || ||||| |||
Sbjct: 649 actaaaaaattggtcgctgaaagagaaggaaaacagccttttgatcccttcccttctttg 708
Query: 683 gctgtcacttcagagggtattcaggccaagggaagctacgctgaagctcaggc 735
| ||| ||| ||||| |||||||| || |||||||| || |||||||||||
Sbjct: 709 attatcaattctgagggcattcaggctaaaggaagctatgcagaagctcaggc 761