Jatropha Genome Database

JcCB0217351.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0217351.10 + phase: 0 /partial
         (474 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29496.m000135 zinc finger protein, putative                           291   2e-78
29848.m004493 Salt-tolerance protein, putative                         64   8e-10

>29496.m000135 zinc finger protein, putative
          Length = 1137

 Score =  291 bits (147), Expect = 2e-78
 Identities = 368/444 (82%), Gaps = 12/444 (2%)
 Strand = Plus / Plus

                                                                        
Query: 42   tcatcaacagtaccgtaattttcaattagggttggagtttgattcctcaaaaccaactta 101
            ||||||||| |||| |||||||||||| || ||||||||||| ||||||||| |  ||||
Sbjct: 690  tcatcaacaataccataattttcaattgggtttggagtttgaatcctcaaaagctgctta 749

                                                                        
Query: 102  cagctataatggatca------------gtctcaatttcttcaatggatgttggagtggt 149
            |||||| ||||| |||            || || |||||  |||||||||||||||||||
Sbjct: 750  cagctacaatggctcaattagccacagtgtatccatttcaccaatggatgttggagtggt 809

                                                                        
Query: 150  gcaagattcaacaatgagtgaaatctcaatctcacactcaagaactccaaaagggacaat 209
             |  |||||||||||||||||   |||||| || ||  || |  |||| |||||||| ||
Sbjct: 810  tcctgattcaacaatgagtgaggcctcaatatcgcatccacggcctcccaaagggaccat 869

                                                                        
Query: 210  tgaccttttctccggtcctccaatgcagatgccatcccaacttagtccgcgggacaggga 269
             ||||||||||| |||||||| || ||||||||||| || || |||||  ||||||||||
Sbjct: 870  cgaccttttctctggtcctcccattcagatgccatcacagctcagtccaagggacaggga 929

                                                                        
Query: 270  agcaagggtcctaagatacagagagaaaaagaagaccagaaagtttgagaagacaatcag 329
             |||||||| |||||||||||||||||||||||||| || ||||||||||| ||||| ||
Sbjct: 930  ggcaagggttctaagatacagagagaaaaagaagacaaggaagtttgagaaaacaattag 989

                                                                        
Query: 330  gtatgcgtcaaggaaggcatacgcagagaccagaccacgaatcaaaggccggtttgcaaa 389
            |||||| || ||||||||||| ||||| || ||||| || ||||||||||||||||||||
Sbjct: 990  gtatgcctcgaggaaggcatatgcagaaactagaccgcggatcaaaggccggtttgcaaa 1049

                                                                        
Query: 390  gagaacagatgtagattttgaagtggatcagatgttctccacaacattaatgacagaaac 449
             ||||||||||||||  ||||||| || || || ||||| ||| || ||||| |||||||
Sbjct: 1050 aagaacagatgtagaagttgaagtagaccaaatcttctcaacagcactaatggcagaaac 1109

                                    
Query: 450  tggatatagcattgtcccatcatt 473
            ||||||| ||||||| ||||||||
Sbjct: 1110 tggatatggcattgttccatcatt 1133


>29848.m004493 Salt-tolerance protein, putative
          Length = 999

 Score = 63.9 bits (32), Expect = 8e-10
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 262 gacagggaagcaagggtcctaagatacagagagaaaaagaagaccagaaagtttgagaag 321
           ||||| ||||| |||||  |||| ||||||||||||| ||||| ||||||||| ||||| 
Sbjct: 799 gacagagaagccagggtattaaggtacagagagaaaaggaagaacagaaagttcgagaaa 858

                                                                   
Query: 322 acaatcaggtatgcgtcaaggaaggcatacgcagagaccagaccacgaatcaaagg 377
           ||||| || || |||||  | || || ||||| || || |||||| ||||||||||
Sbjct: 859 acaattagatacgcgtcgcgaaaagcttacgccgaaacaagaccaagaatcaaagg 914