Jatropha Genome Database
- JcCB0215961.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0215961.20 + phase: 2 /partial
(943 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008586 DNA replication licensing factor MCM2, putative 948 0.0
>30128.m008586 DNA replication licensing factor MCM2, putative
Length = 2793
Score = 948 bits (478), Expect = 0.0
Identities = 825/941 (87%), Gaps = 6/941 (0%)
Strand = Plus / Plus
Query: 1 ggtgagtatccatgaagcaatggagcagcagagtattagcatatcaaaggccgggattgt 60
|||||||||||||||||| |||||||||||||||||||||||||||||||| || || ||
Sbjct: 1851 ggtgagtatccatgaagccatggagcagcagagtattagcatatcaaaggcaggtatagt 1910
Query: 61 aacatctctccaggctcgctgttctgtcattgctgctgcaaatcccattggaggaagata 120
|| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 1911 tacttctctgcaggctcgctgctctgtcattgctgctgcaaatcctgttggaggaagata 1970
Query: 121 tgattcttcaaaaacatttacacaaaatgtcgaattgactgatcccatcatttctcgttt 180
|||||| || ||||||||| |||| || || || ||||||||||||||||||||||||||
Sbjct: 1971 tgattcctcgaaaacattttcacagaacgttgagttgactgatcccatcatttctcgttt 2030
Query: 181 tgacatcctatgtgttgttaaggatgttgtggaccctgttgcagacgagatgcttgctaa 240
||||||||| || |||||||||||||| || ||||| |||||||| ||||||||||| ||
Sbjct: 2031 tgacatcctctgcgttgttaaggatgtggttgacccagttgcagatgagatgcttgcaaa 2090
Query: 241 gtttgttgttgatagtcatttcaagtcacagccaaagggtgctaatatagatgatagatc 300
||| || || ||||||||||| | |||||| || ||||||| ||| | ||| ||
Sbjct: 2091 gttcgtggtagatagtcattttaggtcacaacctaagggtggtaacacagacga------ 2144
Query: 301 cttaagtgagtcccaggaagatgcccaagcctctgccaggccctttgatcctgagattct 360
||| |||||||||||||||||| || ||| ||||| ||||| ||||||| ||||||||
Sbjct: 2145 cttgagtgagtcccaggaagatatcctagcatctgctaggcctgttgatccagagattct 2204
Query: 361 tcctcaagatttgctgaagaaatacattacttatgccaagttgaatgtctttccaaggtt 420
||||||||||||||||||||||||| | |||||||||||||||||||| || ||||||||
Sbjct: 2205 tcctcaagatttgctgaagaaatacttaacttatgccaagttgaatgtattcccaaggtt 2264
Query: 421 gcatgactctgatatggaaaaactgaagcaagtatatgctgaactccgaagagaatcttc 480
|||||| ||||||||||| ||||||| |||||| ||||||||||| | ||||| |||||
Sbjct: 2265 gcatgattctgatatggagaaactgacgcaagtttatgctgaactaaggagagagtcttc 2324
Query: 481 acatggacaaggagtccctatagcagtgaggcacatagaatcaatgatacggatgtctga 540
| ||| || ||||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2325 gcgtggccagggagttccaatagcagtgaggcacatagaatcaatgatacgaatgtctga 2384
Query: 541 atcacatgctcgaatgcacctcaggcagcatgttacagaagaagatgtagatgtggcaat 600
| | |||||| ||||||| ||||| ||||||||||| |||||||| || || |||||||
Sbjct: 2385 agcgcatgctagaatgcatctcagacagcatgttacggaagaagacgtggacatggcaat 2444
Query: 601 acgtgttctgctaaattccttcatttcaacacagaagtacggggtgcagagagctctgca 660
||| ||||| |||||||| |||||||||||||| || || ||||||||||| ||||||||
Sbjct: 2445 acgagttctactaaattctttcatttcaacacaaaaatatggggtgcagagggctctgca 2504
Query: 661 aaagagtttcagaaagtacatcacctacaagatggattacaacagaatgcttctcaacct 720
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 2505 gaagagtttcagaaagtacatcacctacaagatggattacaatagaatgcttctcaatct 2564
Query: 721 cttgcaagaacttgtgaacagggcactgcgctttgaagaaattataactggttccatttc 780
||||||| |||||||| || |||||||||||||||||||||||| ||||||| |||||
Sbjct: 2565 actgcaagagcttgtgaatagagcactgcgctttgaagaaattatatctggttctatttc 2624
Query: 781 agggcttagccatattgatgtgaaagtggaggacttgcggatcatggcggaagaaagagg 840
|||||||||||| |||||||||||||| ||||| ||||||| ||||||||||||| | ||
Sbjct: 2625 agggcttagccacattgatgtgaaagtagaggatttgcggaacatggcggaagaacgtgg 2684
Query: 841 aatcagtgatctaaacccgttcttttccagtactgatttttctgcagcaaattttgagtt 900
|||||||||||||| ||| ||||| | |||| |||||||| |||||||||||||||||
Sbjct: 2685 aatcagtgatctaagccccttcttcacaagtaatgattttttggcagcaaattttgagtt 2744
Query: 901 ggataatgtgcgacaagtgatcaagcatcatcttccaagac 941
|||||||| || || ||||| ||||||| |||||||||||
Sbjct: 2745 ggataatgatcgtcaggtgattaagcatcgtcttccaagac 2785