Jatropha Genome Database

JcCB0212851.10
Show Alignment: 
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0212851.10 - phase: 1 /pseudo
         (713 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29999.m000206 arginine biosynthesis protein argJ 1, putative          670   0.0  

>29999.m000206 arginine biosynthesis protein argJ 1, putative
          Length = 1410

 Score =  670 bits (338), Expect = 0.0
 Identities = 563/638 (88%)
 Strand = Plus / Plus

                                                                       
Query: 15  gcaaagggattcaaagctgcaggcatctatggtggattacgtgcccaaggaaacaaacct 74
           ||||||||||||||||| |  |||||||||||||||||||||||| ||||| | ||||||
Sbjct: 208 gcaaagggattcaaagcggttggcatctatggtggattacgtgccaaaggagagaaacct 267

                                                                       
Query: 75  gatcttgcactggtcacttgcgatgttgatgccgcagctgcaggggcattcactacaaac 134
           ||||||||||| |||||||| ||||||||||| |||||||||||| ||||||||||||| 
Sbjct: 268 gatcttgcacttgtcacttgtgatgttgatgctgcagctgcagggtcattcactacaaat 327

                                                                       
Query: 135 atggttgctgctgcacctgtcttatactgtaaaaatgcgttagacatttctaaaacggca 194
           ||||||||||||||||||||||| ||||||||| |||| || || |||||  ||||||||
Sbjct: 328 atggttgctgctgcacctgtcttgtactgtaaacatgcattggatatttcccaaacggca 387

                                                                       
Query: 195 cgagcagtgttaataaatgctggtcaagcaaatgctgcaacaggtgatgcaggttaccaa 254
           || ||||| || || |||||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 388 cgtgcagtcttgattaatgctggtcaagcaaatgcagcaacgggtgatgcaggttaccag 447

                                                                       
Query: 255 gatgttctagaatgtgctgacgcccttgctaaggtacttaatttgaagcaagaggaagtg 314
           ||||| ||||||||||||||  || |||||| | | |||||  |||||| ||||||||||
Sbjct: 448 gatgtgctagaatgtgctgataccgttgctatgatgcttaaagtgaagcgagaggaagtg 507

                                                                       
Query: 315 ttgattgaatctactggtgtaattggtcacagaataaaaaaggaagcacttctaaatgcg 374
           |||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||| 
Sbjct: 508 ttgattgaatctactggtgtgattggtcaaagaataaaaaaggatgcccttctaaatgca 567

                                                                       
Query: 375 cttcctgaattagtgaattctctcacatcatctcttgaaggggcaggttctgcagcagtg 434
           |||||   |||||| || || |||||||||||| |||| ||||||||||| |||||||||
Sbjct: 568 cttccaacattagttaactcgctcacatcatctgttgagggggcaggttcagcagcagtg 627

                                                                       
Query: 435 gcaattacaactactgaccttgtgagcaagagtgtggcaattgagtcccaagttggagac 494
           ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  
Sbjct: 628 gcaatcacaactactgaccttgtgagcaagagtgtggcaattgagtcccaaattggaggt 687

                                                                       
Query: 495 atgagtgtaagagttgggggaatggccaaaggttctgggatgatccatccaaacatggcc 554
           || | | || |||||||||| |||||||||||||||||||||||||| ||||| ||||| 
Sbjct: 688 ataaatatacgagttggggggatggccaaaggttctgggatgatccacccaaatatggca 747

                                                                       
Query: 555 accatgttgggtgtaataactactgacgcgcttgtcgaagctgatgtttggagaaagatg 614
           || ||| | || || ||||| ||||| || |||||  || ||||||||||||||||||||
Sbjct: 748 actatgcttggcgtgataacgactgatgcccttgttcaaactgatgtttggagaaagatg 807

                                                 
Query: 615 gtgctaattgctgttaaccggagtttcaaccaaataac 652
           |||| || |||||| |||||||||||||||||||||||
Sbjct: 808 gtgcaaactgctgtaaaccggagtttcaaccaaataac 845