Jatropha Genome Database

JcCB0212401.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0212401.10 - phase: 0 
         (468 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29843.m000285 conserved hypothetical protein                          363   e-100
30073.m002201 Ethanolamine-phosphate cytidylyltransferase, putative    66   2e-10

>29843.m000285 conserved hypothetical protein
          Length = 1164

 Score =  363 bits (183), Expect = e-100
 Identities = 339/391 (86%)
 Strand = Plus / Plus

                                                                       
Query: 40  gctcttgtcagtggattgaagtgggtggatgaagtcatagccaattctccttatgccatt 99
           |||||||| |||||||||||||||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 253 gctcttgttagtggattgaagtgggtggatgaagttatagctaatgctccttatgccatt 312

                                                                       
Query: 100 acagagcaattcatgaacactctcttcaatgagcataaaattgactatatcatacatggc 159
           || ||||||||||||||||  || ||||| |||||||| |||||||||||||||||||| 
Sbjct: 313 acggagcaattcatgaacagacttttcaacgagcataagattgactatatcatacatggt 372

                                                                       
Query: 160 gatgatccttgcctgcttcctgatggaactgacgcttatgcattggccaagagggctgga 219
           |||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 373 gatgatccatgcctgcttcctgatggaactgatgcttatgccttggccaagagagctgga 432

                                                                       
Query: 220 cgctataagcagattaaacgcactgaaggggtctccagcactgatattgtaggaaggata 279
           || || ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 433 cgttacaagcagattaaacgcactgaaggagtctccagcacagatattgtaggaaggata 492

                                                                       
Query: 280 ctttctgtggatgatccaaaagtttgtgaagctcatgatgataagttgcctttacctaga 339
           |||| ||   | ||| ||||||| | ||||  |||||||||||| ||| |||||||| ||
Sbjct: 493 ctttttgccaacgatgcaaaagtgtctgaatgtcatgatgataaattgtctttacctgga 552

                                                                       
Query: 340 gatgcctgtaaagcaaatcaatccagtggtgcctatatatctcaatttctaccaacatca 399
           ||||| ||||| | ||| |||| ||   |||   || |||| ||||||||||| ||||| 
Sbjct: 553 gatgcttgtaagggaaaccaatgcaacagtgttcatttatcccaatttctaccgacatcc 612

                                          
Query: 400 cgtcgaattgttcaattttcaaatggcaagg 430
           || ||||| || || ||||||||||| ||||
Sbjct: 613 cggcgaatagtgcagttttcaaatgggaagg 643


>30073.m002201 Ethanolamine-phosphate cytidylyltransferase, putative
          Length = 1257

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 108/133 (81%)
 Strand = Plus / Plus

                                                                       
Query: 134 ataaaattgactatatcatacatggcgatgatccttgcctgcttcctgatggaactgacg 193
           |||| ||||| ||||| || ||||| |||||||||||  ||||||| ||||| ||||| |
Sbjct: 422 ataatattgattatattattcatggggatgatccttgtgtgcttccagatggtactgatg 481

                                                                       
Query: 194 cttatgcattggccaagagggctggacgctataagcagattaaacgcactgaaggggtct 253
           |||||||  |||| ||||  || || || |||||||| ||||| ||||| ||||| || |
Sbjct: 482 cttatgcgctggctaagaaagcgggccgttataagcaaattaagcgcaccgaaggagttt 541

                        
Query: 254 ccagcactgatat 266
           | ||||| |||||
Sbjct: 542 ctagcacggatat 554