Jatropha Genome Database

JcCB0207431.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0207431.10 + phase: 2 /partial
         (406 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011039 C-4 methyl sterol oxidase, putative                     117   5e-26

>30190.m011039 C-4 methyl sterol oxidase, putative
          Length = 732

 Score =  117 bits (59), Expect = 5e-26
 Identities = 275/347 (79%)
 Strand = Plus / Plus

                                                                       
Query: 14  aaatggggctatgagaaaattcaccatgtccaccatcaatacactgctcctataggattg 73
           ||||||||||||||||||||||||  ||| |||||| ||||  |||||||||| || || 
Sbjct: 268 aaatggggctatgagaaaattcacagtgttcaccatgaatatgctgctcctattggtttt 327

                                                                       
Query: 74  gcagcaccatatgcacactgggctgagattttgattcttggatttcctgcatttcttggt 133
           || || |||||||||||||||||||| || ||||| |||||| | ||  | || ||||| 
Sbjct: 328 gctgctccatatgcacactgggctgaaatcttgatccttggaataccatctttccttgga 387

                                                                       
Query: 134 cctgcattagttcctggccacataatcacttactggctctggttcatcttgaggcaaatt 193
           || ||| |||||||||| ||||| ||||| |  ||| | ||| ||   ||  |||| |||
Sbjct: 388 ccagcaatagttcctggacacatgatcacattttggttgtggatcgctttacggcagatt 447

                                                                       
Query: 194 gaagccattgagactcacagcggatatgatattgcgcgaagctttacgaaatatattcca 253
           || ||||||||||| |||||||| |||||  |  |  | |     || ||||||||||||
Sbjct: 448 gaggccattgagacgcacagcgggtatgacttcccctggactccgaccaaatatattcca 507

                                                                       
Query: 254 ttctatggaggtgcagagtaccatgactaccatcactgtgtgggtgcccaaagccaaagc 313
           || ||||| |||||||| |||||||| |||||||| |  || || |  |||||||| || 
Sbjct: 508 ttttatggtggtgcagattaccatgattaccatcattacgtcggaggacaaagccagagt 567

                                                          
Query: 314 aactttgcgtcaattttcacttattgtgattatatttatggaactga 360
           |||||||| ||| ||||||| || ||||| | |||||||||||||||
Sbjct: 568 aactttgcttcagttttcacatactgtgactttatttatggaactga 614