Jatropha Genome Database

JcCB0207251.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0207251.30 + phase: 0 /partial
         (192 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014233 Structural maintenance of chromosome, putative          272   7e-73

>30147.m014233 Structural maintenance of chromosome, putative
          Length = 3531

 Score =  272 bits (137), Expect = 7e-73
 Identities = 176/189 (93%)
 Strand = Plus / Plus

                                                                        
Query: 4    gatgcagctcttgatttaagccacacacagaacatagggagaatgatcaaagctcacttc 63
            |||||||| || ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3340 gatgcagccctagatttgagccacacacagaacatagggagaatgatcaaagctcatttc 3399

                                                                        
Query: 64   ccacattcccagtttattgtggtttcactcaaagaaggcatgttcaacaatgccaatgtc 123
            || ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| 
Sbjct: 3400 ccgcattcccagtttattgtagtttcactgaaagaaggcatgttcaacaatgccaatgtt 3459

                                                                        
Query: 124  ctctttcggacgaaatttgtagatggtgtttcaactgtccagaggactgttgctgctaag 183
            || |||||||| ||||||||||| |||||||||||| ||||||||||||| |||||||||
Sbjct: 3460 ctttttcggactaaatttgtagacggtgtttcaactatccagaggactgtggctgctaag 3519

                     
Query: 184  cagaacaag 192
            |||||||||
Sbjct: 3520 cagaacaag 3528