Jatropha Genome Database

JcCB0207251.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0207251.20 - phase: 0 /partial
         (339 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014233 Structural maintenance of chromosome, putative          246   7e-65

>30147.m014233 Structural maintenance of chromosome, putative
          Length = 3531

 Score =  246 bits (124), Expect = 7e-65
 Identities = 175/192 (91%)
 Strand = Plus / Minus

                                                                        
Query: 148  aagagaagcagtgccaagattagagaaagggcaagcagagatcgttggcctccgcttagc 207
            ||||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||| 
Sbjct: 3305 aagagaagcagtgccaagattaacgaaagggcaagcagagatcgttgacctccacttagt 3246

                                                                        
Query: 208  tctgacaaggactgtttccagacacctccaaatgcaacacgaacctccagaccatccagg 267
            |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 3245 tctgacaaggactgtttccaaacacttccaaatgcaacacgaacctccagaccatccagg 3186

                                                                        
Query: 268  aaactgcagccttctggtggttctagctttgctgtggttccaggcaatagtgtagagaag 327
            ||||| |  ||||| || ||||||||||||||  ||||||||||||| || ||||| |||
Sbjct: 3185 aaactaccaccttcaggaggttctagctttgccatggttccaggcaagagggtagaaaag 3126

                        
Query: 328  atggatccaaag 339
            ||||||||||||
Sbjct: 3125 atggatccaaag 3114