Jatropha Genome Database
- JcCB0206951.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0206951.10 - phase: 0
(639 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29912.m005306 pre-mRNA cleavage factor im, 25kD subunit, putative 476 e-134
>29912.m005306 pre-mRNA cleavage factor im, 25kD subunit, putative
Length = 645
Score = 476 bits (240), Expect = e-134
Identities = 516/608 (84%)
Strand = Plus / Plus
Query: 30 ccatgaaggtagcagggatcaaggttctgttttagacatataccctctcagtagctacta 89
|||||||| ||| |||||||| |||| |||||||||||||||||| || ||||| |||||
Sbjct: 36 ccatgaagctagtagggatcagggttttgttttagacatatacccacttagtagatacta 95
Query: 90 ttttggtgcgaaagaccctctttctttcaagaacgagactttggcagaccgtgtacaaag 149
|||||| | ||||| |||||| |||||| | |||||||| | || |||||||| ||
Sbjct: 96 ttttggatcaaaagatcctcttcctttcagagatgagactttagttgatcgtgtacagag 155
Query: 150 gatgaaatctaattaccttgcccatggattgaggacatatgtggaggcagttattctggt 209
||||||||| || || ||||| |||||||||||||||| |||||||| |||||||||||
Sbjct: 156 gatgaaatccaactatcttgctcatggattgaggacatgcgtggaggctgttattctggt 215
Query: 210 tgagttgttcaaacatcctcatcttttgctattgcaaataaggaattccatctttaggct 269
||||||||||||||| || |||||||||||||||||||| | ||||||||||||| |||
Sbjct: 216 tgagttgttcaaacacccccatcttttgctattgcaaattaaaaattccatctttaagct 275
Query: 270 tcctggtggtcgtttaagacctggagaatcagatattgatggattgaaacgtaagctatc 329
|||||||||||| ||||||| || ||||||||||||| |||||||||||||||||||||
Sbjct: 276 tcctggtggtcgcataagaccaggtgaatcagatattggtggattgaaacgtaagctatc 335
Query: 330 aagaaagctctccggaaatgaggatgaaactgattgggaggtggatgaatgccttgggat 389
|||||| ||||| ||| | ||| ||||||| |||||||||| || |||||||||||
Sbjct: 336 aagaaaactctctaataatcaagatcaaactgactgggaggtgggggagtgccttgggat 395
Query: 390 gtggtggaagcccgactttgaaactttaccatatccatacatgccacctaatgtaaaaac 449
|||||||| ||| ||||| |||||||| ||||| ||| |||| ||||| | |||||
Sbjct: 396 gtggtggaggcctgacttcgaaactttgttgtatccttacttgcctcctaaccttaaaac 455
Query: 450 acccaaggaatgcacgaaactcttccttgtaaggttaccaatgagccgaaagttcattgt 509
||| ||||| ||||| |||||||||||||| |||||||||| ||| | |||||||||||
Sbjct: 456 acctaaggagtgcacaaaactcttccttgtgaggttaccaacgagttgtaagttcattgt 515
Query: 510 accgaaaaaccttaagctgctggcaatcccattgtgccagattcatgaaaatcacaagac 569
||| ||||||||||| ||||| || | ||||||| |||||| ||||| |||||||||||
Sbjct: 516 accaaaaaaccttaaactgctagctgttccattgtcccagatccatgataatcacaagac 575
Query: 570 atatggatcaatcatttcaggaataccacagctgctatctaaattctccttcaacattat 629
||||||| ||| || |||||| | |||||||||||||| |||| |||||||| || ||
Sbjct: 576 atatggaggaataatctcaggagttccacagctgctatcaaaatactccttcagaataat 635
Query: 630 caattctt 637
||||||||
Sbjct: 636 caattctt 643