Jatropha Genome Database

JcCB0203531.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0203531.10 + phase: 0 /partial
         (444 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29848.m004627 conserved hypothetical protein                          172   1e-42

>29848.m004627 conserved hypothetical protein
          Length = 1281

 Score =  172 bits (87), Expect = 1e-42
 Identities = 189/223 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    atacctccaacaagacccaaatctcccaagttaggtcgaaggaagagttcatctcctgtg 60
            |||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 865  atacctacaacaaggcctaaatctcccaagttaggtcgaaagaagagttcatctcctgtg 924

                                                                        
Query: 61   gattctgaaggaaacaacggcgaaaacagtagaccaggcaggctaagtttagacgagaaa 120
            |||||||||| |||  | | | | | | || ||   |  ||||||||||| ||  |||||
Sbjct: 925  gattctgaagaaaatgatgaccagagccgtcgattggctaggctaagtttggatcagaaa 984

                                                                        
Query: 121  gtgtctactaaccgttctgccaaaggaccttcccctatccattcaaagaagccacagcga 180
            ||||||  ||||  | ||||||||||||| |||||||||| |||||||||||||||||| 
Sbjct: 985  gtgtctcataacaatgctgccaaaggaccgtcccctatccgttcaaagaagccacagcgg 1044

                                                       
Query: 181  aaatctcttcctaaactgccttctgagaagaccagtttatcca 223
            || || |||||||||||||||||| ||||||| ||||||||||
Sbjct: 1045 aagtcccttcctaaactgccttctcagaagacaagtttatcca 1087