Jatropha Genome Database

JcCB0203341.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0203341.20 - phase: 2 /pseudo/partial
         (781 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008854 Nitrate/chlorate transporter, putative                  131   7e-30

>30174.m008854 Nitrate/chlorate transporter, putative
          Length = 1101

 Score =  131 bits (66), Expect = 7e-30
 Identities = 162/194 (83%)
 Strand = Plus / Plus

                                                                       
Query: 16  tatgttgcaataaacctcgggtccttggttgcagagacagttttggtttatatagataat 75
           |||||||| ||||| || ||||| ||  |||||||||||||| | || |||  ||| |||
Sbjct: 388 tatgttgctataaatctggggtcattaattgcagagacagttctcgtatatgcagagaat 447

                                                                       
Query: 76  atgggttattggttcgttgggttttggatttgtgttgcttgtgctgttgtcgcatatttg 135
           || || |||||| |  | || || ||||| |||||||||||||||||||| |||||| ||
Sbjct: 448 atagggtattgggtactgggattctggatatgtgttgcttgtgctgttgttgcatatgtg 507

                                                                       
Query: 136 ttgctattgagtggaactttcaggtataggcacttcaaaccgtctggtaatccaatttct 195
           ||||| |||||||||| |||||  |||||||||||||| || ||||||||||| || |||
Sbjct: 508 ttgcttttgagtggaagtttcaaatataggcacttcaagccttctggtaatcccatctct 567

                         
Query: 196 agattctctcaggt 209
           ||||||| ||||||
Sbjct: 568 agattctgtcaggt 581



 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 713 gatgcattgacaagcttagggatcagcttgtccatgccttcaacagccat 762
           |||||||||| ||||| |||| |||| ||||||||| |||||||||||||
Sbjct: 874 gatgcattgaaaagctcaggggtcagtttgtccatgtcttcaacagccat 923