Jatropha Genome Database
- JcCB0200451.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0200451.10 - phase: 0
(1116 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29970.m000980 cyclin d, putative 722 0.0
29801.m003121 cyclin d, putative 100 3e-20
30170.m013822 cyclin d, putative 52 7e-06
>29970.m000980 cyclin d, putative
Length = 831
Score = 722 bits (364), Expect = 0.0
Identities = 720/843 (85%), Gaps = 18/843 (2%)
Strand = Plus / Plus
Query: 274 gctcgtaaagaggctattgattgggttttgagggtgaaagcacattatggattcactgct 333
||||||||||| ||| ||||||||||| |||| || ||||||||||||||||| || |||
Sbjct: 7 gctcgtaaagaagctgttgattgggttatgagagtaaaagcacattatggatttacagct 66
Query: 334 ttgactagtgttcttgctgtgaactactttgataggtttatttcaactttaaagtttcca 393
||||||||||||||||||||||| |||||||| |||||| ||| | |||||||||||||
Sbjct: 67 ttgactagtgttcttgctgtgaattactttgacaggtttgttttgagtttaaagtttcca 126
Query: 394 agagataagccttggatgggccaacttgctgcagtcgcttgtttgtctctggctgctaaa 453
| ||||||||||||||||| ||||||||||| || ||||| ||||||||||||||||||
Sbjct: 127 aatgataagccttggatgggtcaacttgctgctgttgcttgcttgtctctggctgctaaa 186
Query: 454 gtggaggaaacccaagtgcctcttcttctggacttgcaagtggaggaatcaaaatatgtt 513
|| |||||||||||||||||||||||||| ||||||||||||||||| | || ||||||
Sbjct: 187 gtagaggaaacccaagtgcctcttcttctagacttgcaagtggaggaggctaagtatgtt 246
Query: 514 tttgaagctaagactatgaagagaatggagcttctggtgctctctactcttcaatggagg 573
|||||||| |||||||| || |||||||||||| ||| |||||| |||||||||||||||
Sbjct: 247 tttgaagccaagactataaaaagaatggagcttttggcgctctccactcttcaatggagg 306
Query: 574 atgaatcctgtgactccaatttctttctttgatcacattataaggaggcttggtctaaag 633
||||||||| | || |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 307 atgaatcctatcaccccaatttcattctttgatcacattataaggaggcttgggttaaag 366
Query: 634 aaccacttacattgggaatttttgaggaggtgtgagcgtttacttctctctgtcatcgct 693
|||||||| |||||||| ||| | |||||||||||| |||||||||| |||||||| ||
Sbjct: 367 aaccacttgcattgggagtttcttaggaggtgtgagagtttacttctgtctgtcatttct 426
Query: 694 gattcaagattcacgagttatcttccttctatatttgctactgcaattatgttgcatgtt 753
|||||||| || | |||||||||||||||| |||| ||||||||||| ||| ||||||||
Sbjct: 427 gattcaaggtttatgagttatcttccttctgtattagctactgcaataatgctgcatgtt 486
Query: 754 attaaggaggttgaggcatgtaatcaagtggaataccagaatcagcttatggctgtgatc 813
|| |||||||||||| |||||||||||||| |||| |||||||| |||||| | ||||||
Sbjct: 487 ataaaggaggttgagccatgtaatcaagtgcaatatcagaatcaacttatgtccgtgatc 546
Query: 814 aaaattagtgagtctactatattgcaacaggacaaagtcaaagagtgttacaagcacatt 873
||||| || | || ||||||| || ||||||||||||| ||||
Sbjct: 547 aaaatcagcg------------------agaacaaagtgaatgagtgttacaagctcatt 588
Query: 874 ttggagctatcaggcagccagaattcaagtagtaagcgcaaacattcatggatacccagc 933
|||||||| ||||||| ||| || ||| | |||||||| ||| ||| || |||||
Sbjct: 589 ttggagctctcaggcaaccaaaacaaaagctgcaagcgcaagcatccatcaatgcccaga 648
Query: 934 agtccgagtggtgttattgatgcatatttcagctgtgatagctcaaatgactcatgggct 993
||||| | |||| | ||||||||||||||||||||||||||||| ||||| |||||| |
Sbjct: 649 agtccaaatggtatcattgatgcatatttcagctgtgatagctcgaatgattcatggaat 708
Query: 994 gtgtcatcaacagtctcaccatcatcagtgcctcggttcaaaaggaacagggtccaggat 1053
| || || ||||||||| ||||| ||||||||| ||| ||||||| || |||||||
Sbjct: 709 ctatcgtccacagtctcatcatcaccagtgcctctgtttaaaaggagtagaacccaggat 768
Query: 1054 cagcagatgcggttgccctcactgaatcgtatgtttgtggacgtgcttagtagtcctcat 1113
||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 769 cagcagatgcggttgccgtcactaaatcgtatgtttgtggatgtgcttagcagtcctcat 828
Query: 1114 taa 1116
|||
Sbjct: 829 taa 831
>29801.m003121 cyclin d, putative
Length = 1188
Score = 99.6 bits (50), Expect = 3e-20
Identities = 176/218 (80%)
Strand = Plus / Plus
Query: 445 gctgctaaagtggaggaaacccaagtgcctcttcttctggacttgcaagtggaggaatca 504
||||| ||||| || ||||| ||||| ||||||||| | ||| | ||||||||||| ||
Sbjct: 526 gctgcaaaagtagaagaaactcaagttcctcttcttttagacctacaagtggaggataca 585
Query: 505 aaatatgtttttgaagctaagactatgaagagaatggagcttctggtgctctctactctt 564
|| |||||||||||||| || || || | |||||||| ||| ||||||| ||| | |||
Sbjct: 586 aagtatgtttttgaagccaaaaccattcaaagaatggaacttttggtgctgtctgcactt 645
Query: 565 caatggaggatgaatcctgtgactccaatttctttctttgatcacattataaggaggctt 624
|||||| |||| |||| ||||||||| |||| || ||||||| || || || ||||||
Sbjct: 646 aaatggaagatgcatccagtgactccactttcatttcttgatcatatcattagaaggctt 705
Query: 625 ggtctaaagaaccacttacattgggaatttttgaggag 662
|| |||||||||| | |||||||| || ||||||||
Sbjct: 706 ggattaaagaaccatctgcattgggagttcttgaggag 743
>30170.m013822 cyclin d, putative
Length = 1137
Score = 52.0 bits (26), Expect = 7e-06
Identities = 143/182 (78%)
Strand = Plus / Plus
Query: 400 aagccttggatgggccaacttgctgcagtcgcttgtttgtctctggctgctaaagtggag 459
||||| |||||| |||||||||||| || |||||| | || || || || || || |||
Sbjct: 448 aagccatggatgacccaacttgctgctgtggcttgtctttcactcgccgccaaggtcgag 507
Query: 460 gaaacccaagtgcctcttcttctggacttgcaagtggaggaatcaaaatatgtttttgaa 519
|| ||||| ||||||||| | ||||| | || |||||||| || ||||| || ||
Sbjct: 508 gagacccaggtgcctcttttattggaccttcaggtggaggatagcaagtatgtgttcgag 567
Query: 520 gctaagactatgaagagaatggagcttctggtgctctctactcttcaatggaggatgaat 579
||||| ||||| | ||||||||| |||| ||||| || ||||| |||||||| ||||||
Sbjct: 568 gctaaaactattcaaagaatggagattcttgtgctttccactctccaatggagaatgaat 627
Query: 580 cc 581
||
Sbjct: 628 cc 629