Jatropha Genome Database
- JcCB0196521.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0196521.10 + phase: 0 /partial
(1152 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014161 Auxin response factor, putative 954 0.0
>30170.m014161 Auxin response factor, putative
Length = 2853
Score = 954 bits (481), Expect = 0.0
Identities = 924/1068 (86%), Gaps = 14/1068 (1%)
Strand = Plus / Plus
Query: 43 cagctggagtttcaaaatcagaaccaggctcacttgcatgctcaaaccaatgtctggcca 102
||||| || ||||||||||| |||||| |||||||||||| ||||||||| ||||||
Sbjct: 1741 cagctagaatttcaaaatcaaaaccagagtcacttgcatgcacaaaccaatctctggctt 1800
Query: 103 atgcag-caactgttagagccttccactctgcactctcagcaaattaatataccccaagc 161
| ||| ||| | || || ||||| | |||||| | ||||||||| || | ||||||||
Sbjct: 1801 gtacagtcaagt-ttggaaccttctatcctgcacccccagcaaattcatgtgccccaagc 1859
Query: 162 tgattctaatgttctcaatggatcacttcctttcttagacactgatgagtggatatcaaa 221
|||| ||||| ||||| | |||||||||||| |||||| |||||| ||||| || ||
Sbjct: 1860 tgatgctaataccttcaattgctcacttcctttcctagacagtgatgaatggatgtcgaa 1919
Query: 222 tccgtcttcttgcatacctctccctgggatatatggatcatcagggcctctgtcaatgtt 281
|| ||||||| || || | |||||||| ||||| || ||||| || | ||||||||
Sbjct: 1920 ccc---ttcttgcctatcttttcctgggatgtatggttcttcaggaccggtatcaatgtt 1976
Query: 282 tggattgcaagaacaatcatccatactccctgaagcaattaatccttctttacctttaat 341
|||||| ||||||| |||| ||||||||||||||||| ||||| ||| ||||||| ||
Sbjct: 1977 tggattccaagaaccatcagccatactccctgaagcaggaaatccctctgtacctttgat 2036
Query: 342 gaatcaggatttgtgggatcaacagctaaacaatttaagatttttatccccaccaagcca 401
||||||||||||||||||||| ||||| ||||||||||| |||||||||||| |||||||
Sbjct: 2037 gaatcaggatttgtgggatcagcagctcaacaatttaaggtttttatccccagcaagcca 2096
Query: 402 actcgttcctttagctcagcaagacctctgtagccttaactcaagtggtgcaaaagattt 461
| |||||||||||||||||||| |||||||||||| |||| || ||||||| |||
Sbjct: 2097 aaa---tcctttagctcagcaagacccctgtagccttaattcaactgtagcaaaagcttt 2153
Query: 462 gtcagatgagagcaatgatcaaagtgggatatatggctctcttagtgttgatgttgggaa 521
|||||| ||||| || ||||| ||||| || ||||| ||||||| | |||||||||| ||
Sbjct: 2154 gtcagacgagagtaacgatcagagtggaatttatggttctcttaatattgatgttggtaa 2213
Query: 522 tgggggaagtgccgtaattgatccttctgtctctaatactcttttggatgagttgtgcac 581
|||||||||||| || |||||||||||||| || ||| | ||||||||||||| |||||
Sbjct: 2214 tgggggaagtgcagtgattgatccttctgtttcaaatgccattttggatgagttctgcac 2273
Query: 582 gtcgaaggatgctgatttccaaaacccttcagattgtttggtcggtaa------cttgag 635
| |||||||||||||||||||| || |||||||||||||| ||||| ||| ||
Sbjct: 2274 agccaaggatgctgatttccaaaatccatcagattgtttggtgggtaaagaggtcttcag 2333
Query: 636 ctcaagccaggatgttcagtcacagattacttcagcaagcttagcagattcccaagcttt 695
| ||||||||||||||||||| |||||||| |||| ||| |||||||||| ||||||||
Sbjct: 2334 cacaagccaggatgttcagtctcagattacctcagttagcctagcagattctcaagcttt 2393
Query: 696 ctcacagcaagactttccagacagctcaggtggtacatcttcaagcaatgtggatattga 755
||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||| ||||
Sbjct: 2394 ctcgcagcaagacttcccagacagctcaggcggtacatcttctagcaatgtggattttga 2453
Query: 756 caagggcaattatatgcagaataactcatggcagcaagttgctccacgggtgcggacata 815
||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 2454 caagggcaattatatgcagaataactcatggcagcaagttgctccccgagtgcgaacata 2513
Query: 816 cacaaaggttcaaaaggctggctcagtggggaggtcgatcgatgtctcaagttttagaaa 875
|||||||||||||||||||||||| || |||||||| || || || || |||||| |||
Sbjct: 2514 cacaaaggttcaaaaggctggctctgttgggaggtcaattgacgtttccggttttaaaaa 2573
Query: 876 ctacgaagaactatgttctgcaatcgaatgcatgtttggacttgaagggttgcttaataa 935
||||||||| |||||||| ||||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 2574 ctacgaagagctatgttcagcaattgaatgcatgtttggacttgaggggctgcttaataa 2633
Query: 936 tccaagggagtcaggttggaagctggtgtatgtggactatgagaatgatgttctattgat 995
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 2634 tccaagggagtcagggtggaagctggtgtatgtggactatgagaatgatgttctacttat 2693
Query: 996 tggagatgatccatgggaggagtttgttggttgtgtccgctgcataaggatcctgtcacc 1055
|||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 2694 tggagatgatccttgggaggaatttgttggctgtgtccgctgcataagaatcctgtcacc 2753
Query: 1056 ttctgaagttcagcagatgagtgaggagggaatgaagctccttaacaa 1103
||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 2754 ttctgaagttcagcaaatgagtgaggagggaatgaagcttcttaacaa 2801