Jatropha Genome Database

JcCB0194971.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0194971.10 - phase: 0 /pseudo
         (525 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30015.m000215 alanine-glyoxylate aminotransferase, putative           305   1e-82
28196.m000210 alanine-glyoxylate aminotransferase, putative            66   2e-10

>30015.m000215 alanine-glyoxylate aminotransferase, putative
          Length = 1443

 Score =  305 bits (154), Expect = 1e-82
 Identities = 307/358 (85%)
 Strand = Plus / Plus

                                                                       
Query: 113 ttatccccaaaatgcccccttttgattactctcctccgccgtataccggtccctccagcg 172
           ||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||  ||
Sbjct: 122 ttatcccaaaaatgccaccttttgattactctcctccgccgtacaccggtccctccgccg 181

                                                                       
Query: 173 aagagattatgactaagcgaaaagagtttctcagcccttctttattccacttctataaaa 232
             ||||| ||  | ||||| ||||||||||| ||||||||  ||||||| |||||  | |
Sbjct: 182 ccgagatcatagccaagcgtaaagagtttcttagcccttccatattccatttctacgaca 241

                                                                       
Query: 233 aacccttgaacgtggtggatggtaagatgcagtacttattcgatgagaacgggcgtagat 292
           | ||  |||||||||||||||| ||||||||||| ||||| || ||||||||||||||||
Sbjct: 242 agcctctgaacgtggtggatgggaagatgcagtatttatttgacgagaacgggcgtagat 301

                                                                       
Query: 293 accttgatgcttttggagggattgctacggtgtgctgcggtcattgccatccagatataa 352
           || |||||||||||||||||||||| |||||||| |||||||| |||||||| ||  |  
Sbjct: 302 acgttgatgcttttggagggattgcgacggtgtgttgcggtcactgccatcctgaggttg 361

                                                                       
Query: 353 tcgactcaatcgtcaaccagatcaagcgcttgcaacactccaccgtactctacctcaatc 412
           | |||||||| ||||| || ||||| ||| | |||||||| || ||||| ||||| ||||
Sbjct: 362 tggactcaatagtcaaacaaatcaaccgcatacaacactctactgtactttaccttaatc 421

                                                                     
Query: 413 atgccattgctgatttcgctgaggccttagcctctaagatgcctggcaatcttaaggt 470
           |||||||  ||||||||||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 422 atgccatctctgatttcgctgaggccttggcctctaaaatgcctggcaatctcaaggt 479


>28196.m000210 alanine-glyoxylate aminotransferase, putative
          Length = 1452

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                       
Query: 410 atcatgccattgctgatttcgctgaggccttagcctctaagatgcctggcaatcttaagg 469
           ||||||| ||||||||||| |||||||| |||||  | ||||||||||| ||||||||||
Sbjct: 428 atcatgctattgctgattttgctgaggctttagctgccaagatgcctggaaatcttaagg 487

            
Query: 470 t 470
           |
Sbjct: 488 t 488