Jatropha Genome Database
- JcCB0193291.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0193291.10 - phase: 1 /pseudo/partial
(657 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29751.m001884 ubiquinone biosynthesis protein, putative 392 e-108
30174.m009092 ubiquinone biosynthesis protein, putative 325 2e-88
29848.m004584 hypothetical protein 60 2e-08
>29751.m001884 ubiquinone biosynthesis protein, putative
Length = 693
Score = 392 bits (198), Expect = e-108
Identities = 504/604 (83%), Gaps = 4/604 (0%)
Strand = Plus / Plus
Query: 42 ggttcagcaattggtgcattggtagacccaagaagagcagattttatagcagctcttgga 101
||||||||| | ||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 61 ggttcagcactgggtgcattgctagacccaagaagagcagatttgatagcagctcttgga 120
Query: 102 gaaacgactggtaagcctgcttttgaaaaagttcttcagaggatgaagaggagcccagaa 161
||||| ||||| || ||||||||||| | ||||||||||| ||||| || ||| |||
Sbjct: 121 gaaacaactgggaaacctgcttttgagagggttcttcagagaatgaaaagttcccctgaa 180
Query: 162 ggcagggctgtagtcttggagagaccgcatgtgatttctgcagaagttcgacacgcatgg 221
||||| || ||| | ||||| ||||| | ||| | |||||| | | || | ||||||
Sbjct: 181 ggcagagcagtacttttggacagaccacgtgttgtatctgcaaatataggatatgcatgg 240
Query: 222 gatttgccagaaaacacatatggtgctgcctatgcaagattcatgggatctacgaacttt 281
||||| |||| ||||||| |||||||||||| || |||||||||||||| | |||||||
Sbjct: 241 gatttaccagctaacacatttggtgctgcctacgctagattcatgggatccaggaacttt 300
Query: 282 tccccagacgatcgtccaccagtgcggttcatggacacagatgaactggcatatgtagct 341
||||| || || ||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 301 tccccggatgaccgtccactagtgcgcttcatggacacagatgaattggcatatgtagcc 360
Query: 342 ttgagagctcgtgaaccgcaagacttctggcacacccttttcgaccttcccaccaaccta 401
|| | ||||||||| ||| || |||||||| ||| | |||||||| ||||||||||||
Sbjct: 361 atgcgggctcgtgaagtgcatgatttctggcataccttattcgacctccccaccaaccta 420
Query: 402 atctgtgaatcagcactcaaggtgataagagtttgagcaaatgtatctgccaatgtgtct 461
| |||| |||||||| |||||||| |||||||||||||||||| || || |||||| |
Sbjct: 421 gttggtgagtcagcactgaaggtgat-agagtttgagcaaatgtaccttcctatgtgtat 479
Query: 462 aatgtctgtggtaggtgccacagcaagatttagtgagaagcagaggagtttgttcttcca 521
||||||||||||||| | |||| ||||||| | ||||||||||| | |||||||| ||
Sbjct: 480 aatgtctgtggtaggaggcacaacaagattcaacgagaagcagagaaaattgttcttaca 539
Query: 522 tcactacttcccatgggctgtccaagcaggaatgcagtgcacagatctcatgtgtgtgta 581
|| || ||||||||||| || | ||| |||||||||||||||||||| |||||||| ||
Sbjct: 540 gcattatttcccatgggcagttcgagctggaatgcagtgcacagatcttatgtgtgtata 599
Query: 582 ttactatgaggagcactttcataaggatataaatgatgtccgtagaaaatggggtataat 641
| |||||| ||||||||||| ||||| || |||||||||| || |||| ||| || ||
Sbjct: 600 t---tatgagaagcactttcatgaggatttagatgatgtccgaaggaaattgggcattat 656
Query: 642 tcct 645
||||
Sbjct: 657 tcct 660
>30174.m009092 ubiquinone biosynthesis protein, putative
Length = 600
Score = 325 bits (164), Expect = 2e-88
Identities = 377/446 (84%), Gaps = 4/446 (0%)
Strand = Plus / Plus
Query: 211 gacacgcatgggatttgccagaaaacacatatggtgctgcctatgcaagattcatgggat 270
|||| ||||||||||| |||| ||||||| |||||||||||| || |||||||||||||
Sbjct: 137 gacatgcatgggatttaccagctaacacatttggtgctgcctacgctagattcatgggat 196
Query: 271 ctacgaacttttccccagacgatcgtccaccagtgcggttcatggacacagatgaactgg 330
| | |||||||||||| || || |||||||||||||| |||||||||||||||||| |||
Sbjct: 197 ccaggaacttttccccggatgaccgtccaccagtgcgcttcatggacacagatgaattgg 256
Query: 331 catatgtagctttgagagctcgtgaaccgcaagacttctggcacacccttttcgaccttc 390
|||||||| | || | ||||||||| ||| || |||||||||||| | |||||||| |
Sbjct: 257 catatgtaaccatgcgggctcgtgaagtgcatgatttctggcacaccttattcgacctcc 316
Query: 391 ccaccaacctaatctgtgaatcagcactcaaggtgataagagtttgagcaaatgtatctg 450
||||||||||||| |||| ||||| || |||||||| |||||||||||||||||| ||
Sbjct: 317 ccaccaacctaattggtgagtcagccctgaaggtgat-agagtttgagcaaatgtacctt 375
Query: 451 ccaatgtgtctaatgtctgtggtaggtgccacagcaagatttagtgagaagcagaggagt 510
|| |||||| |||||||||||||||| | |||| ||||||||| ||||||||||| |
Sbjct: 376 cctatgtgtataatgtctgtggtaggaggcacaacaagatttaacgagaagcagagaaaa 435
Query: 511 ttgttcttccatcactacttcccatgggctgtccaagcaggaatgcagtgcacagatctc 570
|||||||| || || || ||||||||||| || | ||| ||||||||||||||||||||
Sbjct: 436 ttgttcttacagcattatttcccatgggcagttcgagctggaatgcagtgcacagatctt 495
Query: 571 atgtgtgtgtattactatgaggagcactttcataaggatataaatgatgtccgtagaaaa 630
|||||||| ||| |||||| ||||||| ||| ||||| || |||||||||| || |||
Sbjct: 496 atgtgtgtatat---tatgagaagcacttccatgaggatttagatgatgtccgaaggaaa 552
Query: 631 tggggtataattcctacccctgctgt 656
| ||| || |||||| | ||||||||
Sbjct: 553 ttgggcattattcctgctcctgctgt 578
>29848.m004584 hypothetical protein
Length = 477
Score = 60.0 bits (30), Expect = 2e-08
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 294 cgtccaccagtgcggttcatggacacagatgaactggcatatgtagctttgagagctcgt 353
|||||||||||| | ||||||||||||||||| ||||||||| ||| || | |||| |
Sbjct: 181 cgtccaccagtgtgcttcatggacacagatgacttggcatatggagccatgcgggctcat 240
Query: 354 gaaccgcaagacttctggcacacccttttcgaccttcccaccaacctaat 403
||| ||| || |||||||||||| | || || | ||||||||||||||
Sbjct: 241 gaagtgcatgatttctggcacaccatatttgatccccccaccaacctaat 290