Jatropha Genome Database

JcCB0190191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0190191.10 + phase: 2 /partial
         (252 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006089 isoamylase, putative                                    256   5e-68

>29908.m006089 isoamylase, putative
          Length = 2352

 Score =  256 bits (129), Expect = 5e-68
 Identities = 219/249 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    ctgtaatcatcctgtggtcatggagctcatcctggacagcctaagacactgggtggcaga 60
            |||||| ||||||||||||||||||||||||||||| ||||||||||| |||||  | ||
Sbjct: 1251 ctgtaaccatcctgtggtcatggagctcatcctggaaagcctaagacattgggtcactga 1310

                                                                        
Query: 61   atatcatgtggatggatttcgatttgaccttgccagtatactttgtcgaggaacggatgg 120
            |||||||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||
Sbjct: 1311 atatcatgtggatggattccgatttgaccttgcaagtgtactttgtcgaggaacagatgg 1370

                                                                        
Query: 121  ctctccacttgattctcccccagttatcagggcaattgctaaggaccctatcctgtcaag 180
              |||| ||| || |||| || || || ||||||||||| || ||  |||||||||||||
Sbjct: 1371 tactcctcttaatgctcctccggtcattagggcaattgccaaagatgctatcctgtcaag 1430

                                                                        
Query: 181  atgtaaaattattgcagagccttgggattgtggtggcctttatctggttggaaagtttcc 240
            ||||||||||||| |||| || ||||||||||| || ||||||||||||||||| |||||
Sbjct: 1431 atgtaaaattatttcagaaccctgggattgtggaggtctttatctggttggaaaatttcc 1490

                     
Query: 241  aaactggga 249
             ||||||||
Sbjct: 1491 taactggga 1499