Jatropha Genome Database
- JcCB0189041.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0189041.20 - phase: 2 /partial
(589 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29598.m000468 Light-inducible protein CPRF-2, putative 400 e-111
29883.m001986 DNA binding protein, putative 56 2e-07
>29598.m000468 Light-inducible protein CPRF-2, putative
Length = 1362
Score = 400 bits (202), Expect = e-111
Identities = 464/549 (84%), Gaps = 3/549 (0%)
Strand = Plus / Plus
Query: 1 aatgctctcaaatagagagtcagctagacggtcaagaagaagaaagcaggcccatttgac 60
|||||| ||||||||||||||||||||||| || |||||||||||||||| ||| ||||
Sbjct: 762 aatgctttcaaatagagagtcagctagacgatcgcgaagaagaaagcaggctcatctgac 821
Query: 61 tgagcttgagacgcaggttgcccaattgagagttgaaaattcttctctgctgaaacgcct 120
||||| ||||| |||||||| ||| ||||||| |||||||| ||||| | || || ||
Sbjct: 822 agagctcgagacacaggttgctcaactgagagtcgaaaattcatctctattaaagcgtct 881
Query: 121 ctccgacatcagcaataagtacaatgatgcttctgtggataacagagttttaaaagctga 180
| | ||||| ||| ||||||||||||| | |||| ||||||||||| |||||||||||
Sbjct: 882 cactgacataagccataagtacaatgaatcagctgtcgataacagagtattaaaagctga 941
Query: 181 cgttgaaacattaagagctaaggtgaagatggctgaggagactgtcaaaaggataactgg 240
||||||||||| ||||| || |||||||||||||||||||| ||||||||||| || ||
Sbjct: 942 tgttgaaacattgagagcgaaagtgaagatggctgaggagacggtcaaaaggattacggg 1001
Query: 241 gttgaatcctttgtcccattctatgcctgagatatccacaatcagcatgccatcatttga 300
||||||| || ||| |||| | || ||||| || |||||||| ||||||||||| |||||
Sbjct: 1002 gttgaattctctgttccataccatacctgaaatgtccacaatgagcatgccatcgtttga 1061
Query: 301 tggaagcccttctgacactttgacagatgctgctgttcctattcaagatga-accga--a 357
|||||||||||||||||| | || ||||| || |||||| | |||||||| || || |
Sbjct: 1062 tggaagcccttctgacacatcaactgatgcggcagttcctgtccaagatgacacagagca 1121
Query: 358 acgcttgtatcagcttccaaataatcccctatccactcgtgacccgagagtcaacaatgg 417
| || ||||||| |||||||||||| | ||||||| |||||| ||||| |||||||
Sbjct: 1122 tcagttttatcagcctccaaataatccattgtccactcatgacccaagagtaaacaatgc 1181
Query: 418 tttgacaaacatctcttcagctgaaaatattcagccaccttctggaacagctggattagc 477
|||| || ||||||| |||| |||||| | ||||||| ||||||| |||| || ||||
Sbjct: 1182 tttggcagacatctcctcagttgaaaacgtgcagccacattctggagcagcaggtttagg 1241
Query: 478 agggaacaagattggacgaacagcttctttgcagcgagtggctagcttggagcatttgca 537
|||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 1242 agggaacaagatgggacggacagcttccttgcagcgagtggctagcttggagcatttaca 1301
Query: 538 gaaacggat 546
|||||||||
Sbjct: 1302 gaaacggat 1310
>29883.m001986 DNA binding protein, putative
Length = 1326
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 8 tcaaatagagagtcagctagacggtcaagaagaagaaagcaggc 51
|||||| |||||||||| ||||| |||||||||||||| |||||
Sbjct: 673 tcaaatcgagagtcagccagacgttcaagaagaagaaaacaggc 716